Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Y_RNA.773-201ENST00000607168 90 ntBASIC1.23□□□□□ -2.21
COPB1P53618 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
COPB1P53618 RNY1P13-201ENST00000365030 105 ntBASIC1.22□□□□□ -2.21
COPB1P53618 Y_RNA.330-201ENST00000365230 109 ntBASIC1.22□□□□□ -2.21
COPB1P53618 RNU6-53P-201ENST00000365367 106 ntBASIC1.22□□□□□ -2.21
COPB1P53618 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
COPB1P53618 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
COPB1P53618 RNU6-1165P-201ENST00000410119 107 ntBASIC1.22□□□□□ -2.21
COPB1P53618 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.22□□□□□ -2.21
COPB1P53618 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COPB1P53618 RNU6-616P-201ENST00000384353 107 ntBASIC1.21□□□□□ -2.22
COPB1P53618 RNY4P18-201ENST00000391107 89 ntBASIC1.21□□□□□ -2.22
COPB1P53618 AC063976.4-201ENST00000421971 163 ntBASIC1.21□□□□□ -2.22
COPB1P53618 Y_RNA.709-201ENST00000516952 92 ntBASIC1.21□□□□□ -2.22
COPB1P53618 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
COPB1P53618 AC106800.4-201ENST00000614905 153 ntBASIC1.21□□□□□ -2.22
COPB1P53618 MIR1255B1-201ENST00000636325 63 ntBASIC1.21□□□□□ -2.22
COPB1P53618 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COPB1P53618 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
COPB1P53618 SNORD77B-201ENST00000391112 67 ntBASIC1.2□□□□□ -2.22
COPB1P53618 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.2□□□□□ -2.22
COPB1P53618 RNA5SP237-201ENST00000410414 113 ntBASIC1.2□□□□□ -2.22
COPB1P53618 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
COPB1P53618 RPL39P34-201ENST00000477141 156 ntBASIC1.2□□□□□ -2.22
COPB1P53618 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COPB1P53618 Y_RNA.85-201ENST00000363014 111 ntBASIC1.19□□□□□ -2.22
COPB1P53618 RNU6-949P-201ENST00000384040 107 ntBASIC1.19□□□□□ -2.22
COPB1P53618 SNORA2B-201ENST00000384583 137 ntBASIC1.19□□□□□ -2.22
COPB1P53618 SNORD111-201ENST00000408139 94 ntBASIC1.19□□□□□ -2.22
COPB1P53618 AC096949.1-201ENST00000412047 152 ntBASIC1.19□□□□□ -2.22
COPB1P53618 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
COPB1P53618 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
COPB1P53618 MIR18B-201ENST00000454574 71 ntBASIC1.19□□□□□ -2.22
COPB1P53618 snoU13.21-201ENST00000459368 105 ntBASIC1.19□□□□□ -2.22
COPB1P53618 SNORD67.1-201ENST00000516618 108 ntBASIC1.19□□□□□ -2.22
COPB1P53618 RNU6-919P-201ENST00000516731 104 ntBASIC1.19□□□□□ -2.22
COPB1P53618 RNU7-137P-201ENST00000516788 62 ntBASIC1.19□□□□□ -2.22
COPB1P53618 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
COPB1P53618 FAM71BP1-201ENST00000604431 523 ntBASIC1.19□□□□□ -2.22
COPB1P53618 RMST_2.1-201ENST00000617263 136 ntBASIC1.19□□□□□ -2.22
COPB1P53618 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
COPB1P53618 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
COPB1P53618 AC008163.1-202ENST00000636004 2889 ntBASIC1.19□□□□□ -2.22
COPB1P53618 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
COPB1P53618 MT-TF-201ENST00000387314 71 ntBASIC1.18□□□□□ -2.22
COPB1P53618 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
COPB1P53618 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.18□□□□□ -2.22
COPB1P53618 AC023827.1-201ENST00000569247 97 ntBASIC1.18□□□□□ -2.22
COPB1P53618 AL162726.3-218ENST00000636401 95 ntBASIC1.18□□□□□ -2.22
COPB1P53618 RNU6-363P-201ENST00000362895 105 ntBASIC1.17□□□□□ -2.22
COPB1P53618 SNORD114-10-201ENST00000363409 72 ntBASIC1.17□□□□□ -2.22
COPB1P53618 SNORA63.5-201ENST00000363548 123 ntBASIC1.17□□□□□ -2.22
COPB1P53618 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
COPB1P53618 U8.15-201ENST00000390947 134 ntBASIC1.17□□□□□ -2.22
COPB1P53618 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.17□□□□□ -2.22
COPB1P53618 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
COPB1P53618 RNU6-1107P-201ENST00000364817 104 ntBASIC1.16□□□□□ -2.22
COPB1P53618 SNORD115-35-201ENST00000365122 82 ntBASIC1.16□□□□□ -2.22
COPB1P53618 Y_RNA.323-201ENST00000365157 109 ntBASIC1.16□□□□□ -2.22
COPB1P53618 MIR206-201ENST00000384872 86 ntBASIC1.16□□□□□ -2.22
COPB1P53618 RNU6-1307P-201ENST00000391012 103 ntBASIC1.16□□□□□ -2.22
COPB1P53618 AL035461.1-201ENST00000421490 332 ntBASIC1.16□□□□□ -2.22
COPB1P53618 AL353813.1-201ENST00000440700 253 ntBASIC1.16□□□□□ -2.22
COPB1P53618 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
COPB1P53618 RNU6-412P-201ENST00000516434 106 ntBASIC1.16□□□□□ -2.22
COPB1P53618 AC068339.1-201ENST00000526965 141 ntBASIC1.16□□□□□ -2.22
COPB1P53618 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
COPB1P53618 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
COPB1P53618 RNU6-94P-201ENST00000607728 107 ntBASIC1.16□□□□□ -2.22
COPB1P53618 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.22
COPB1P53618 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
COPB1P53618 RNU6-816P-201ENST00000390914 107 ntBASIC1.15□□□□□ -2.23
COPB1P53618 RNU6-1268P-201ENST00000391214 107 ntBASIC1.15□□□□□ -2.23
COPB1P53618 RNU6-1239P-201ENST00000391310 107 ntBASIC1.15□□□□□ -2.23
COPB1P53618 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.15□□□□□ -2.23
COPB1P53618 RNU7-2P-201ENST00000516096 62 ntBASIC1.15□□□□□ -2.23
COPB1P53618 RNU6-521P-201ENST00000516663 105 ntBASIC1.15□□□□□ -2.23
COPB1P53618 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
COPB1P53618 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
COPB1P53618 RNU6-755P-201ENST00000364400 103 ntBASIC1.14□□□□□ -2.23
COPB1P53618 RNU4-67P-201ENST00000364569 141 ntBASIC1.14□□□□□ -2.23
COPB1P53618 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
COPB1P53618 U8.6-201ENST00000364939 135 ntBASIC1.14□□□□□ -2.23
COPB1P53618 Y_RNA.309-201ENST00000365046 111 ntBASIC1.14□□□□□ -2.23
COPB1P53618 RNU6-934P-201ENST00000365154 107 ntBASIC1.14□□□□□ -2.23
COPB1P53618 MIR1912-201ENST00000410389 80 ntBASIC1.14□□□□□ -2.23
COPB1P53618 SNORD83.1-201ENST00000411362 77 ntBASIC1.14□□□□□ -2.23
COPB1P53618 MIR5009-201ENST00000578736 100 ntBASIC1.14□□□□□ -2.23
COPB1P53618 AL391516.1-201ENST00000554380 2449 ntBASIC1.14□□□□□ -2.23
COPB1P53618 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
COPB1P53618 RNU6-1014P-201ENST00000383940 103 ntBASIC1.13□□□□□ -2.23
COPB1P53618 RNU6-44P-201ENST00000384045 107 ntBASIC1.13□□□□□ -2.23
COPB1P53618 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
COPB1P53618 RNU6-1321P-201ENST00000390905 107 ntBASIC1.13□□□□□ -2.23
COPB1P53618 RNU6-679P-201ENST00000391003 106 ntBASIC1.13□□□□□ -2.23
COPB1P53618 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.13□□□□□ -2.23
COPB1P53618 AC105081.1-201ENST00000617727 106 ntBASIC1.13□□□□□ -2.23
COPB1P53618 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
COPB1P53618 Y_RNA.49-201ENST00000362714 112 ntBASIC1.12□□□□□ -2.23
COPB1P53618 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms