Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RNU6-275P-201ENST00000364910 107 ntBASIC0.05□□□□□ -2.4
SMSP52788 Y_RNA.556-201ENST00000384677 113 ntBASIC0.05□□□□□ -2.4
SMSP52788 Y_RNA.571-201ENST00000384753 98 ntBASIC0.05□□□□□ -2.4
SMSP52788 RNA5SP227-201ENST00000516184 113 ntBASIC0.05□□□□□ -2.4
SMSP52788 RNY3P16-201ENST00000516338 101 ntBASIC0.05□□□□□ -2.4
SMSP52788 SNORA25.16-201ENST00000516741 121 ntBASIC0.05□□□□□ -2.4
SMSP52788 MTND5P34-201ENST00000568888 325 ntBASIC0.05□□□□□ -2.4
SMSP52788 Y_RNA.812-201ENST00000610788 101 ntBASIC0.05□□□□□ -2.4
SMSP52788 Y_RNA.784-201ENST00000613803 101 ntBASIC0.05□□□□□ -2.4
SMSP52788 Y_RNA.787-201ENST00000616522 101 ntBASIC0.05□□□□□ -2.4
SMSP52788 Y_RNA.780-201ENST00000617336 101 ntBASIC0.05□□□□□ -2.4
SMSP52788 Y_RNA.801-201ENST00000619005 101 ntBASIC0.05□□□□□ -2.4
SMSP52788 MIR6755-201ENST00000619993 66 ntBASIC0.05□□□□□ -2.4
SMSP52788 MTND5P32-201ENST00000560711 1802 ntBASIC0.05□□□□□ -2.4
SMSP52788 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
SMSP52788 RNU4-16P-201ENST00000364737 141 ntBASIC0.04□□□□□ -2.4
SMSP52788 Y_RNA.294-201ENST00000364916 102 ntBASIC0.04□□□□□ -2.4
SMSP52788 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
SMSP52788 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
SMSP52788 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.04□□□□□ -2.4
SMSP52788 AC008737.2-201ENST00000599446 118 ntBASIC0.04□□□□□ -2.4
SMSP52788 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
SMSP52788 Y_RNA.20-201ENST00000362479 113 ntBASIC0.03□□□□□ -2.4
SMSP52788 RNU4-58P-201ENST00000363192 141 ntBASIC0.03□□□□□ -2.4
SMSP52788 SNORA63-201ENST00000363450 132 ntBASIC0.03□□□□□ -2.4
SMSP52788 Y_RNA.171-201ENST00000363760 102 ntBASIC0.03□□□□□ -2.4
SMSP52788 RNU6-738P-201ENST00000384531 106 ntBASIC0.03□□□□□ -2.4
SMSP52788 MIRLET7F2-201ENST00000385277 83 ntBASIC0.03□□□□□ -2.4
SMSP52788 RNU6-493P-201ENST00000391321 108 ntBASIC0.03□□□□□ -2.4
SMSP52788 RNA5SP476-201ENST00000516613 103 ntBASIC0.03□□□□□ -2.4
SMSP52788 MIR4308-201ENST00000580634 81 ntBASIC0.03□□□□□ -2.4
SMSP52788 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.03□□□□□ -2.4
SMSP52788 Y_RNA.75-201ENST00000362927 97 ntBASIC0.02□□□□□ -2.41
SMSP52788 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
SMSP52788 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
SMSP52788 Y_RNA.626-201ENST00000411288 95 ntBASIC0.02□□□□□ -2.41
SMSP52788 AL022718.1-201ENST00000412004 84 ntBASIC0.02□□□□□ -2.41
SMSP52788 AC244669.1-204ENST00000621564 178 ntBASIC0.02□□□□□ -2.41
SMSP52788 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
SMSP52788 Y_RNA.170-201ENST00000363746 110 ntBASIC0.01□□□□□ -2.41
SMSP52788 Y_RNA.182-201ENST00000363880 111 ntBASIC0.01□□□□□ -2.41
SMSP52788 Y_RNA.478-201ENST00000384358 107 ntBASIC0.01□□□□□ -2.41
SMSP52788 RNU4-70P-201ENST00000384579 139 ntBASIC0.01□□□□□ -2.41
SMSP52788 RNU7-113P-201ENST00000459273 62 ntBASIC0.01□□□□□ -2.41
SMSP52788 RNA5SP236-201ENST00000516169 116 ntBASIC0.01□□□□□ -2.41
SMSP52788 TUG1_4.1-201ENST00000619464 181 ntBASIC0.01□□□□□ -2.41
SMSP52788 MIR6086-201ENST00000638065 55 ntBASIC0.01□□□□□ -2.41
SMSP52788 RNU6-923P-201ENST00000364753 107 ntBASIC0□□□□□ -2.41
SMSP52788 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
SMSP52788 Y_RNA.470-201ENST00000384307 117 ntBASIC0□□□□□ -2.41
SMSP52788 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
SMSP52788 AC011603.4-201ENST00000611325 277 ntBASIC0□□□□□ -2.41
SMSP52788 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.01□□□□□ -2.41
SMSP52788 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
SMSP52788 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.01□□□□□ -2.41
SMSP52788 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.01□□□□□ -2.41
SMSP52788 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
SMSP52788 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
SMSP52788 MTND2P23-201ENST00000422990 651 ntBASIC-0.01□□□□□ -2.41
SMSP52788 HAR1A.1-201ENST00000459583 118 ntBASIC-0.01□□□□□ -2.41
SMSP52788 RNA5SP133-201ENST00000363368 119 ntBASIC-0.02□□□□□ -2.41
SMSP52788 MIR1265-201ENST00000408444 86 ntBASIC-0.02□□□□□ -2.41
SMSP52788 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.02□□□□□ -2.41
SMSP52788 RNU6-531P-201ENST00000516694 104 ntBASIC-0.02□□□□□ -2.41
SMSP52788 DEFB131E-201ENST00000532329 154 ntBASIC-0.02□□□□□ -2.41
SMSP52788 AC098479.1-201ENST00000609225 154 ntBASIC-0.02□□□□□ -2.41
SMSP52788 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.03□□□□□ -2.41
SMSP52788 SNORD114-10-201ENST00000363409 72 ntBASIC-0.03□□□□□ -2.41
SMSP52788 AC244505.6-201ENST00000452829 130 ntBASIC-0.03□□□□□ -2.41
SMSP52788 RNU4-71P-201ENST00000516258 113 ntBASIC-0.03□□□□□ -2.41
SMSP52788 RNA5SP33-201ENST00000516687 98 ntBASIC-0.03□□□□□ -2.41
SMSP52788 MIR5589-201ENST00000579442 60 ntBASIC-0.03□□□□□ -2.41
SMSP52788 MIR4743-201ENST00000584576 69 ntBASIC-0.03□□□□□ -2.41
SMSP52788 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
SMSP52788 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.04□□□□□ -2.42
SMSP52788 SNORD27-201ENST00000363981 72 ntBASIC-0.04□□□□□ -2.42
SMSP52788 RNA5SP245-201ENST00000364239 121 ntBASIC-0.04□□□□□ -2.42
SMSP52788 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.04□□□□□ -2.42
SMSP52788 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.04□□□□□ -2.42
SMSP52788 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.04□□□□□ -2.42
SMSP52788 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.04□□□□□ -2.42
SMSP52788 MIR1912-201ENST00000410389 80 ntBASIC-0.04□□□□□ -2.42
SMSP52788 MTCYBP9-201ENST00000431021 303 ntBASIC-0.04□□□□□ -2.42
SMSP52788 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
SMSP52788 RNU7-137P-201ENST00000516788 62 ntBASIC-0.04□□□□□ -2.42
SMSP52788 AC141557.1-201ENST00000540982 400 ntBASIC-0.04□□□□□ -2.42
SMSP52788 MIR4636-201ENST00000582271 80 ntBASIC-0.04□□□□□ -2.42
SMSP52788 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
SMSP52788 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.04□□□□□ -2.42
SMSP52788 U6.106-201ENST00000636360 105 ntBASIC-0.04□□□□□ -2.42
SMSP52788 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
SMSP52788 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.05□□□□□ -2.42
SMSP52788 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
SMSP52788 RNA5SP128-201ENST00000365305 116 ntBASIC-0.05□□□□□ -2.42
SMSP52788 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.05□□□□□ -2.42
SMSP52788 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.05□□□□□ -2.42
SMSP52788 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.05□□□□□ -2.42
SMSP52788 AC138749.4-201ENST00000563970 127 ntBASIC-0.05□□□□□ -2.42
SMSP52788 MIR3149-201ENST00000584629 83 ntBASIC-0.05□□□□□ -2.42
SMSP52788 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms