Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU6-918P-201ENST00000391219 106 ntBASIC0.21□□□□□ -2.38
GPC3P51654 SNORA75.5-201ENST00000391291 81 ntBASIC0.21□□□□□ -2.38
GPC3P51654 RNU7-79P-201ENST00000516082 62 ntBASIC0.21□□□□□ -2.38
GPC3P51654 Y_RNA.697-201ENST00000516776 113 ntBASIC0.21□□□□□ -2.38
GPC3P51654 RNU7-35P-201ENST00000517174 62 ntBASIC0.21□□□□□ -2.38
GPC3P51654 RNU6-111P-201ENST00000517179 105 ntBASIC0.21□□□□□ -2.38
GPC3P51654 MIR3646-201ENST00000578301 84 ntBASIC0.21□□□□□ -2.38
GPC3P51654 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
GPC3P51654 MIR6718-201ENST00000616153 80 ntBASIC0.21□□□□□ -2.38
GPC3P51654 Y_RNA.52-201ENST00000362760 96 ntBASIC0.2□□□□□ -2.38
GPC3P51654 Y_RNA.60-201ENST00000362831 98 ntBASIC0.2□□□□□ -2.38
GPC3P51654 Y_RNA.489-201ENST00000384410 101 ntBASIC0.2□□□□□ -2.38
GPC3P51654 RNU2-59P-201ENST00000410482 191 ntBASIC0.2□□□□□ -2.38
GPC3P51654 SNRPGP12-201ENST00000449481 213 ntBASIC0.2□□□□□ -2.38
GPC3P51654 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.2□□□□□ -2.38
GPC3P51654 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.2□□□□□ -2.38
GPC3P51654 RNU6-690P-201ENST00000365242 106 ntBASIC0.19□□□□□ -2.38
GPC3P51654 Y_RNA.357-201ENST00000365487 109 ntBASIC0.19□□□□□ -2.38
GPC3P51654 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
GPC3P51654 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
GPC3P51654 RNA5SP33-201ENST00000516687 98 ntBASIC0.19□□□□□ -2.38
GPC3P51654 MIR3149-201ENST00000584629 83 ntBASIC0.19□□□□□ -2.38
GPC3P51654 MIR4639-201ENST00000584938 69 ntBASIC0.19□□□□□ -2.38
GPC3P51654 MIR2909-201ENST00000617113 69 ntBASIC0.19□□□□□ -2.38
GPC3P51654 AL109933.3-201ENST00000619095 188 ntBASIC0.19□□□□□ -2.38
GPC3P51654 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
GPC3P51654 SNORD18B-201ENST00000365659 72 ntBASIC0.18□□□□□ -2.38
GPC3P51654 RNU6-535P-201ENST00000384722 107 ntBASIC0.18□□□□□ -2.38
GPC3P51654 MIRLET7F2-201ENST00000385277 83 ntBASIC0.18□□□□□ -2.38
GPC3P51654 Y_RNA.617-201ENST00000410920 90 ntBASIC0.18□□□□□ -2.38
GPC3P51654 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.18□□□□□ -2.38
GPC3P51654 RNU6-848P-201ENST00000515948 107 ntBASIC0.18□□□□□ -2.38
GPC3P51654 RNU6-617P-201ENST00000516147 107 ntBASIC0.18□□□□□ -2.38
GPC3P51654 RNU6-473P-201ENST00000516164 107 ntBASIC0.18□□□□□ -2.38
GPC3P51654 RNA5SP236-201ENST00000516169 116 ntBASIC0.18□□□□□ -2.38
GPC3P51654 RNU6-1049P-201ENST00000516414 107 ntBASIC0.18□□□□□ -2.38
GPC3P51654 RNA5SP268-201ENST00000516828 124 ntBASIC0.18□□□□□ -2.38
GPC3P51654 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.18□□□□□ -2.38
GPC3P51654 DEFB131E-201ENST00000532329 154 ntBASIC0.18□□□□□ -2.38
GPC3P51654 AC009779.6-201ENST00000603972 165 ntBASIC0.18□□□□□ -2.38
GPC3P51654 SNORA25.18-201ENST00000607153 114 ntBASIC0.18□□□□□ -2.38
GPC3P51654 AC098479.1-201ENST00000609225 154 ntBASIC0.18□□□□□ -2.38
GPC3P51654 MIR6844-201ENST00000637122 62 ntBASIC0.18□□□□□ -2.38
GPC3P51654 AC091304.10-201ENST00000641554 121 ntBASIC0.18□□□□□ -2.38
GPC3P51654 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
GPC3P51654 Y_RNA.299-201ENST00000364973 94 ntBASIC0.17□□□□□ -2.38
GPC3P51654 Y_RNA.307-201ENST00000365022 117 ntBASIC0.17□□□□□ -2.38
GPC3P51654 RNU6-768P-201ENST00000384683 107 ntBASIC0.17□□□□□ -2.38
GPC3P51654 MIR644A-201ENST00000385262 94 ntBASIC0.17□□□□□ -2.38
GPC3P51654 AC096949.1-201ENST00000412047 152 ntBASIC0.17□□□□□ -2.38
GPC3P51654 SNORA31.14-201ENST00000516728 116 ntBASIC0.17□□□□□ -2.38
GPC3P51654 SCARNA16.5-201ENST00000517114 183 ntBASIC0.17□□□□□ -2.38
GPC3P51654 MIR4503-201ENST00000582187 83 ntBASIC0.17□□□□□ -2.38
GPC3P51654 AC072026.1-201ENST00000605023 201 ntBASIC0.17□□□□□ -2.38
GPC3P51654 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
GPC3P51654 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
GPC3P51654 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
GPC3P51654 Y_RNA.171-201ENST00000363760 102 ntBASIC0.16□□□□□ -2.38
GPC3P51654 Y_RNA.233-201ENST00000364407 101 ntBASIC0.16□□□□□ -2.38
GPC3P51654 RNU6-1318P-201ENST00000365389 103 ntBASIC0.16□□□□□ -2.38
GPC3P51654 RNU6-463P-201ENST00000384340 107 ntBASIC0.16□□□□□ -2.38
GPC3P51654 RNU6-291P-201ENST00000384720 107 ntBASIC0.16□□□□□ -2.38
GPC3P51654 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
GPC3P51654 AC112693.2-201ENST00000556538 232 ntBASIC0.16□□□□□ -2.38
GPC3P51654 MIR4305-201ENST00000583252 102 ntBASIC0.16□□□□□ -2.38
GPC3P51654 MIR6828-201ENST00000636181 60 ntBASIC0.16□□□□□ -2.38
GPC3P51654 MIR101-2-201ENST00000362195 79 ntBASIC0.15□□□□□ -2.39
GPC3P51654 Y_RNA.32-201ENST00000362589 110 ntBASIC0.15□□□□□ -2.39
GPC3P51654 Y_RNA.120-201ENST00000363304 110 ntBASIC0.15□□□□□ -2.39
GPC3P51654 SNORD114-10-201ENST00000363409 72 ntBASIC0.15□□□□□ -2.39
GPC3P51654 Y_RNA.531-201ENST00000384589 121 ntBASIC0.15□□□□□ -2.39
GPC3P51654 RNU6-239P-201ENST00000390990 99 ntBASIC0.15□□□□□ -2.39
GPC3P51654 RNA5SP227-201ENST00000516184 113 ntBASIC0.15□□□□□ -2.39
GPC3P51654 Y_RNA.680-201ENST00000516441 93 ntBASIC0.15□□□□□ -2.39
GPC3P51654 RNU6-1258P-201ENST00000516911 111 ntBASIC0.15□□□□□ -2.39
GPC3P51654 RNA5SP47-201ENST00000517230 109 ntBASIC0.15□□□□□ -2.39
GPC3P51654 AC138907.4-201ENST00000570107 226 ntBASIC0.15□□□□□ -2.39
GPC3P51654 Y_RNA.85-201ENST00000363014 111 ntBASIC0.14□□□□□ -2.39
GPC3P51654 SNORA36.1-201ENST00000363424 132 ntBASIC0.14□□□□□ -2.39
GPC3P51654 SNORD28-201ENST00000384706 75 ntBASIC0.14□□□□□ -2.39
GPC3P51654 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
GPC3P51654 AC073261.1-201ENST00000429409 121 ntBASIC0.14□□□□□ -2.39
GPC3P51654 SNORA25.16-201ENST00000516741 121 ntBASIC0.14□□□□□ -2.39
GPC3P51654 RNU7-10P-201ENST00000607194 63 ntBASIC0.14□□□□□ -2.39
GPC3P51654 Y_RNA.56-201ENST00000362798 112 ntBASIC0.13□□□□□ -2.39
GPC3P51654 RNA5SP133-201ENST00000363368 119 ntBASIC0.13□□□□□ -2.39
GPC3P51654 Y_RNA.470-201ENST00000384307 117 ntBASIC0.13□□□□□ -2.39
GPC3P51654 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
GPC3P51654 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
GPC3P51654 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.13□□□□□ -2.39
GPC3P51654 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
GPC3P51654 RNU6-1082P-201ENST00000364574 107 ntBASIC0.12□□□□□ -2.39
GPC3P51654 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
GPC3P51654 Y_RNA.644-201ENST00000459006 113 ntBASIC0.12□□□□□ -2.39
GPC3P51654 Y_RNA.674-201ENST00000516362 113 ntBASIC0.12□□□□□ -2.39
GPC3P51654 MTND5P34-201ENST00000568888 325 ntBASIC0.12□□□□□ -2.39
GPC3P51654 AC021443.1-201ENST00000604478 211 ntBASIC0.12□□□□□ -2.39
GPC3P51654 AC141273.2-201ENST00000618989 130 ntBASIC0.12□□□□□ -2.39
GPC3P51654 Y_RNA.144-201ENST00000363521 113 ntBASIC0.11□□□□□ -2.39
GPC3P51654 RNU6-47P-201ENST00000383866 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 254.1 ms