Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.06□□□□□ -2.24
SOX2P48431 Y_RNA.773-201ENST00000607168 90 ntBASIC1.06□□□□□ -2.24
SOX2P48431 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
SOX2P48431 U8.15-201ENST00000390947 134 ntBASIC1.05□□□□□ -2.24
SOX2P48431 MIR1257-201ENST00000408490 117 ntBASIC1.05□□□□□ -2.24
SOX2P48431 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
SOX2P48431 RPS26P5-201ENST00000418544 335 ntBASIC1.05□□□□□ -2.24
SOX2P48431 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
SOX2P48431 RPL39P34-201ENST00000477141 156 ntBASIC1.05□□□□□ -2.24
SOX2P48431 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
SOX2P48431 RNU6-412P-201ENST00000516434 106 ntBASIC1.05□□□□□ -2.24
SOX2P48431 MIR6129-201ENST00000616087 109 ntBASIC1.05□□□□□ -2.24
SOX2P48431 MIR1-1-201ENST00000362147 71 ntBASIC1.04□□□□□ -2.24
SOX2P48431 Y_RNA.35-201ENST00000362601 101 ntBASIC1.04□□□□□ -2.24
SOX2P48431 SNORA63.5-201ENST00000363548 123 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
SOX2P48431 Y_RNA.507-201ENST00000384500 99 ntBASIC1.04□□□□□ -2.24
SOX2P48431 Y_RNA.549-201ENST00000384657 102 ntBASIC1.04□□□□□ -2.24
SOX2P48431 MIR206-201ENST00000384872 86 ntBASIC1.04□□□□□ -2.24
SOX2P48431 MIR499A-201ENST00000384903 122 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.04□□□□□ -2.24
SOX2P48431 SNORD93-201ENST00000408813 74 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-447P-201ENST00000410293 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-1118P-201ENST00000410382 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-1076P-201ENST00000410397 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-355P-201ENST00000410427 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-791P-201ENST00000410467 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-705P-201ENST00000410601 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-1100P-201ENST00000410691 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-860P-201ENST00000410860 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-1217P-201ENST00000411276 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU6-785P-201ENST00000411324 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
SOX2P48431 RNU7-185P-201ENST00000459215 60 ntBASIC1.04□□□□□ -2.24
SOX2P48431 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
SOX2P48431 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.04□□□□□ -2.24
SOX2P48431 RNU7-2P-201ENST00000516096 62 ntBASIC1.04□□□□□ -2.24
SOX2P48431 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.04□□□□□ -2.24
SOX2P48431 AL359821.1-201ENST00000605519 182 ntBASIC1.04□□□□□ -2.24
SOX2P48431 U6.90-201ENST00000614007 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 AC105081.1-201ENST00000617727 106 ntBASIC1.04□□□□□ -2.24
SOX2P48431 U6.70-201ENST00000620287 104 ntBASIC1.04□□□□□ -2.24
SOX2P48431 AL035470.1-201ENST00000622571 220 ntBASIC1.04□□□□□ -2.24
SOX2P48431 MIR1255B1-201ENST00000636325 63 ntBASIC1.04□□□□□ -2.24
SOX2P48431 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SOX2P48431 Y_RNA.309-201ENST00000365046 111 ntBASIC1.03□□□□□ -2.24
SOX2P48431 MIR100-201ENST00000385259 80 ntBASIC1.03□□□□□ -2.24
SOX2P48431 RNU4-62P-201ENST00000410125 130 ntBASIC1.03□□□□□ -2.24
SOX2P48431 MIR1912-201ENST00000410389 80 ntBASIC1.03□□□□□ -2.24
SOX2P48431 AC133485.1-201ENST00000567176 124 ntBASIC1.03□□□□□ -2.24
SOX2P48431 MIR3660-201ENST00000584845 100 ntBASIC1.03□□□□□ -2.24
SOX2P48431 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.03□□□□□ -2.24
SOX2P48431 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.03□□□□□ -2.24
SOX2P48431 AL162726.3-218ENST00000636401 95 ntBASIC1.03□□□□□ -2.24
SOX2P48431 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.03□□□□□ -2.24
SOX2P48431 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.25
SOX2P48431 Y_RNA.49-201ENST00000362714 112 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU6-363P-201ENST00000362895 105 ntBASIC1.02□□□□□ -2.25
SOX2P48431 Y_RNA.85-201ENST00000363014 111 ntBASIC1.02□□□□□ -2.25
SOX2P48431 Y_RNA.118-201ENST00000363300 101 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU4-67P-201ENST00000364569 141 ntBASIC1.02□□□□□ -2.25
SOX2P48431 Y_RNA.281-201ENST00000364774 94 ntBASIC1.02□□□□□ -2.25
SOX2P48431 SNORD115-35-201ENST00000365122 82 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU1-36P-201ENST00000365130 165 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU6-429P-201ENST00000384582 108 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU6-816P-201ENST00000390914 107 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU6-1268P-201ENST00000391214 107 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU6-1239P-201ENST00000391310 107 ntBASIC1.02□□□□□ -2.25
SOX2P48431 MIR942-201ENST00000401111 86 ntBASIC1.02□□□□□ -2.25
SOX2P48431 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
SOX2P48431 AC015818.7-201ENST00000428754 109 ntBASIC1.02□□□□□ -2.25
SOX2P48431 AC087499.7-201ENST00000441958 109 ntBASIC1.02□□□□□ -2.25
SOX2P48431 SNORD124-201ENST00000459577 104 ntBASIC1.02□□□□□ -2.25
SOX2P48431 Y_RNA.155-201ENST00000363632 101 ntBASIC1.01□□□□□ -2.25
SOX2P48431 RNU6-1325P-201ENST00000364905 105 ntBASIC1.01□□□□□ -2.25
SOX2P48431 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
SOX2P48431 Y_RNA.448-201ENST00000384185 108 ntBASIC1.01□□□□□ -2.25
SOX2P48431 RNU6-1321P-201ENST00000390905 107 ntBASIC1.01□□□□□ -2.25
SOX2P48431 MIR1827-201ENST00000408549 66 ntBASIC1.01□□□□□ -2.25
SOX2P48431 BTF3P4-201ENST00000418852 495 ntBASIC1.01□□□□□ -2.25
SOX2P48431 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.01□□□□□ -2.25
SOX2P48431 RNU6-977P-201ENST00000516411 103 ntBASIC1.01□□□□□ -2.25
SOX2P48431 RNU6-521P-201ENST00000516663 105 ntBASIC1.01□□□□□ -2.25
SOX2P48431 MIR4421-201ENST00000578133 69 ntBASIC1.01□□□□□ -2.25
SOX2P48431 MIR4676-201ENST00000583078 72 ntBASIC1.01□□□□□ -2.25
SOX2P48431 AC020891.4-201ENST00000605745 93 ntBASIC1.01□□□□□ -2.25
SOX2P48431 AL136317.1-201ENST00000612653 226 ntBASIC1.01□□□□□ -2.25
SOX2P48431 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SOX2P48431 Y_RNA.98-201ENST00000363109 102 ntBASIC1□□□□□ -2.25
SOX2P48431 RNU6-865P-201ENST00000364772 107 ntBASIC1□□□□□ -2.25
SOX2P48431 RNU6-409P-201ENST00000384114 104 ntBASIC1□□□□□ -2.25
SOX2P48431 MIR125B2-201ENST00000385128 89 ntBASIC1□□□□□ -2.25
SOX2P48431 MIR518E-201ENST00000385252 88 ntBASIC1□□□□□ -2.25
SOX2P48431 SNORA7.5-201ENST00000410672 110 ntBASIC1□□□□□ -2.25
SOX2P48431 RNU4-83P-201ENST00000410863 133 ntBASIC1□□□□□ -2.25
SOX2P48431 RNU7-48P-201ENST00000458875 63 ntBASIC1□□□□□ -2.25
SOX2P48431 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1□□□□□ -2.25
SOX2P48431 AC068339.1-201ENST00000526965 141 ntBASIC1□□□□□ -2.25
SOX2P48431 RNU6-403P-201ENST00000363163 104 ntBASIC0.99□□□□□ -2.25
SOX2P48431 Y_RNA.508-201ENST00000384502 114 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms