Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 SNORA27.4-201ENST00000516650 95 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
RPL28P46779 AC006504.6-201ENST00000590142 199 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 SNORA25.1-201ENST00000362326 128 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU6-623P-201ENST00000363143 105 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU6-290P-201ENST00000365212 101 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU6-326P-201ENST00000365480 107 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU6-900P-201ENST00000384498 102 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 AL606845.1-201ENST00000404881 255 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU7-152P-201ENST00000458982 64 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU7-113P-201ENST00000459273 62 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNA5SP33-201ENST00000516687 98 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 RNU6-570P-201ENST00000517051 105 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 MIR3681-201ENST00000580089 72 ntBASIC-0.86□□□□□ -2.55
RPL28P46779 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 SNORD114-15-201ENST00000364687 72 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 RNU6-154P-201ENST00000384306 106 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 MIR617-201ENST00000385030 97 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 RNU7-195P-201ENST00000458793 62 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 AC084781.2-201ENST00000615568 161 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.87□□□□□ -2.55
RPL28P46779 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 MIR204-201ENST00000385200 110 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 MIR616-201ENST00000385293 97 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 MIR548I2-201ENST00000408348 149 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 Z83846.1-201ENST00000446798 265 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 MIR1270-201ENST00000459320 83 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 AC021146.6-201ENST00000514659 117 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 MIR4500-201ENST00000579472 76 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.88□□□□□ -2.55
RPL28P46779 MIR548AE2-201ENST00000583456 67 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 MIR6851-201ENST00000617060 67 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 MIR6086-201ENST00000638065 55 ntBASIC-0.88□□□□□ -2.55
RPL28P46779 UBE2WP1-201ENST00000362030 340 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU6-211P-201ENST00000384047 107 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNY1P6-201ENST00000384193 109 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU6-524P-201ENST00000384270 107 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 SNORD63B-201ENST00000411005 70 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 AC082651.2-201ENST00000496833 166 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU6-138P-201ENST00000515952 107 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 SNORD38.3-201ENST00000516599 73 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU6-881P-201ENST00000516813 102 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 RNU6-453P-201ENST00000516819 85 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 AP001328.1-201ENST00000528550 176 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 AC011603.4-201ENST00000611325 277 ntBASIC-0.89□□□□□ -2.55
RPL28P46779 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 AC098614.3-201ENST00000438957 440 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 AP000676.1-201ENST00000533307 52 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 RNU6-86P-201ENST00000606534 107 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 AC037487.3-201ENST00000606668 112 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 AC145423.2-201ENST00000610631 239 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 AC112487.2-201ENST00000637950 304 ntBASIC-0.9□□□□□ -2.55
RPL28P46779 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 MIR1302-11-201ENST00000408051 138 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 MIR1302-9-201ENST00000408365 138 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 MIR1302-10-201ENST00000408734 138 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 AC016907.1-201ENST00000419483 435 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 RNU7-55P-201ENST00000459426 62 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 RNU6-976P-201ENST00000516086 111 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 RNU6-277P-201ENST00000516272 106 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 IGKV1-22-201ENST00000524313 326 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 MIR4460-201ENST00000577862 86 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 MIR1302-2-201ENST00000607096 138 ntBASIC-0.91□□□□□ -2.56
RPL28P46779 MIR20A-201ENST00000362279 71 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 RNU4-36P-201ENST00000364294 144 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 RNY4P3-201ENST00000365254 95 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 SNORA63.7-201ENST00000365579 123 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 RNU6-901P-201ENST00000384593 106 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 MT-TL1-201ENST00000386347 75 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 SNORA79-201ENST00000408376 140 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.92□□□□□ -2.56
RPL28P46779 FGF7P6-202ENST00000451282 293 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 RNU7-106P-201ENST00000459514 67 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 RNU6-561P-201ENST00000516222 102 ntBASIC-0.92□□□□□ -2.56
RPL28P46779 U4.1-201ENST00000620349 87 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms