Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNU6-791P-201ENST00000410467 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 RNU6-705P-201ENST00000410601 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 RNU6-1100P-201ENST00000410691 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 RNU6-860P-201ENST00000410860 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 RNU6-1217P-201ENST00000411276 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 RNU6-785P-201ENST00000411324 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 AC096949.1-201ENST00000412047 152 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 COX6CP6-201ENST00000490840 228 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 U6.90-201ENST00000614007 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 U6.70-201ENST00000620287 104 ntBASIC0.83□□□□□ -2.28
PTPN9P43378 SNORD114-10-201ENST00000363409 72 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 Y_RNA.198-201ENST00000364013 98 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 Y_RNA.294-201ENST00000364916 102 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 RNU6-364P-201ENST00000384387 107 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 SNORD77B-201ENST00000391112 67 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 RNU1-119P-201ENST00000391122 165 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 MIR548M-201ENST00000408260 86 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 SNORD99-201ENST00000408612 74 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 AC015818.7-201ENST00000428754 109 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 AC087499.7-201ENST00000441958 109 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 RNU7-156P-201ENST00000517214 74 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
PTPN9P43378 Y_RNA.213-201ENST00000364178 111 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 SNORA32-201ENST00000384072 121 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 MIR573-201ENST00000384964 99 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 MIR520H-201ENST00000385126 88 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 MIRLET7F2-201ENST00000385277 83 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 RNU7-137P-201ENST00000516788 62 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 RNU6-765P-201ENST00000516916 99 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 AP003327.1-201ENST00000529684 127 ntBASIC0.81□□□□□ -2.28
PTPN9P43378 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
PTPN9P43378 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
PTPN9P43378 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 Y_RNA.42-201ENST00000362660 108 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 Y_RNA.224-201ENST00000364308 111 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 MIR518E-201ENST00000385252 88 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 MIR759-201ENST00000390224 91 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 Y_RNA.588-201ENST00000391254 102 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 RNU4-83P-201ENST00000410863 133 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.8□□□□□ -2.28
PTPN9P43378 RNU7-102P-201ENST00000458948 62 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 MIR1270-201ENST00000459320 83 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 RNU6-1194P-201ENST00000516208 104 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 AC090897.1-201ENST00000580909 226 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 MIR3163-201ENST00000581592 73 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
PTPN9P43378 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
PTPN9P43378 RNU6-1104P-201ENST00000384723 104 ntBASIC0.79□□□□□ -2.28
PTPN9P43378 AC244098.3-201ENST00000424803 96 ntBASIC0.79□□□□□ -2.28
PTPN9P43378 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.79□□□□□ -2.28
PTPN9P43378 AC022523.2-201ENST00000561045 150 ntBASIC0.79□□□□□ -2.28
PTPN9P43378 MIR4491-201ENST00000581087 68 ntBASIC0.79□□□□□ -2.28
PTPN9P43378 MIR8066-201ENST00000617280 78 ntBASIC0.79□□□□□ -2.28
PTPN9P43378 RNU6-774P-201ENST00000363238 107 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 SNORD58C-201ENST00000365223 64 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 RNU6-80P-201ENST00000384195 107 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 SNORD100-201ENST00000408573 76 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 SNORD67.1-201ENST00000516618 108 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 MIR6082-201ENST00000613604 109 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
PTPN9P43378 SNORD115-19-201ENST00000363098 82 ntBASIC0.77□□□□□ -2.29
PTPN9P43378 SNORD115-18-201ENST00000363293 82 ntBASIC0.77□□□□□ -2.29
PTPN9P43378 SNORD115-17-201ENST00000364612 82 ntBASIC0.77□□□□□ -2.29
PTPN9P43378 RPS29P1-201ENST00000465274 159 ntBASIC0.77□□□□□ -2.29
PTPN9P43378 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.77□□□□□ -2.29
PTPN9P43378 Y_RNA.116-201ENST00000363292 103 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 RNU6-187P-201ENST00000384139 106 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 Y_RNA.528-201ENST00000384575 108 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 MIR1263-201ENST00000408324 86 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 RNU6-1211P-201ENST00000459179 105 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 RNU6-781P-201ENST00000516377 101 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 RNU6-971P-201ENST00000516920 106 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 RNU6-448P-201ENST00000517052 107 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 AL359881.1-201ENST00000602916 267 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 AC008608.1-201ENST00000603910 127 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 AC025166.1-201ENST00000612411 163 ntBASIC0.76□□□□□ -2.29
PTPN9P43378 RNU6-235P-201ENST00000362644 107 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 RNY1P2-201ENST00000364820 117 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 Y_RNA.346-201ENST00000365385 112 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
PTPN9P43378 RNU6-772P-201ENST00000516042 105 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 CYP3A137P-201ENST00000562436 69 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 AC011195.1-201ENST00000578177 177 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 AL589743.1-201ENST00000551932 2712 ntBASIC0.75□□□□□ -2.29
PTPN9P43378 Y_RNA.13-201ENST00000362403 112 ntBASIC0.74□□□□□ -2.29
PTPN9P43378 RNU6-403P-201ENST00000363163 104 ntBASIC0.74□□□□□ -2.29
PTPN9P43378 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
PTPN9P43378 TMSB4XP3-201ENST00000445144 114 ntBASIC0.74□□□□□ -2.29
PTPN9P43378 AC002350.1-201ENST00000490759 375 ntBASIC0.74□□□□□ -2.29
PTPN9P43378 RNU6-1061P-201ENST00000516530 99 ntBASIC0.74□□□□□ -2.29
PTPN9P43378 Y_RNA.712-201ENST00000517011 92 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms