Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RNU6-315P-201ENST00000362666 107 ntBASIC1.93□□□□□ -2.1
GDNFP39905 RNU6-396P-201ENST00000365369 105 ntBASIC1.93□□□□□ -2.1
GDNFP39905 Y_RNA.508-201ENST00000384502 114 ntBASIC1.93□□□□□ -2.1
GDNFP39905 JTBP1-201ENST00000441314 247 ntBASIC1.93□□□□□ -2.1
GDNFP39905 MIR30D-201ENST00000362283 70 ntBASIC1.92□□□□□ -2.1
GDNFP39905 RNU6-571P-201ENST00000384128 107 ntBASIC1.92□□□□□ -2.1
GDNFP39905 RNU6-1165P-201ENST00000410119 107 ntBASIC1.92□□□□□ -2.1
GDNFP39905 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
GDNFP39905 AC005908.1-201ENST00000468701 347 ntBASIC1.92□□□□□ -2.1
GDNFP39905 RNU2-19P-201ENST00000517288 84 ntBASIC1.92□□□□□ -2.1
GDNFP39905 U7.4-201ENST00000614961 63 ntBASIC1.92□□□□□ -2.1
GDNFP39905 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
GDNFP39905 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
GDNFP39905 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
GDNFP39905 RNU6-624P-201ENST00000363411 107 ntBASIC1.91□□□□□ -2.1
GDNFP39905 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
GDNFP39905 SNORA67.4-201ENST00000384688 142 ntBASIC1.91□□□□□ -2.1
GDNFP39905 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
GDNFP39905 snoU13.11-201ENST00000459219 104 ntBASIC1.91□□□□□ -2.1
GDNFP39905 Y_RNA.648-201ENST00000459455 110 ntBASIC1.91□□□□□ -2.1
GDNFP39905 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
GDNFP39905 RNU6-947P-201ENST00000516264 106 ntBASIC1.91□□□□□ -2.1
GDNFP39905 MIR4264-201ENST00000583520 66 ntBASIC1.91□□□□□ -2.1
GDNFP39905 uc_338.6-201ENST00000613544 171 ntBASIC1.91□□□□□ -2.1
GDNFP39905 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
GDNFP39905 SNORA72.6-201ENST00000384520 129 ntBASIC1.9□□□□□ -2.11
GDNFP39905 MIR516A2-201ENST00000384888 90 ntBASIC1.9□□□□□ -2.11
GDNFP39905 MIR516A1-201ENST00000385033 90 ntBASIC1.9□□□□□ -2.11
GDNFP39905 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.9□□□□□ -2.11
GDNFP39905 RNA5SP508-201ENST00000411327 119 ntBASIC1.9□□□□□ -2.11
GDNFP39905 snoU13.25-201ENST00000458945 104 ntBASIC1.9□□□□□ -2.11
GDNFP39905 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
GDNFP39905 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
GDNFP39905 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
GDNFP39905 MIR5007-201ENST00000583098 95 ntBASIC1.9□□□□□ -2.11
GDNFP39905 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
GDNFP39905 RNU6-1094P-201ENST00000362416 104 ntBASIC1.89□□□□□ -2.11
GDNFP39905 HSPE1P24-201ENST00000450782 238 ntBASIC1.89□□□□□ -2.11
GDNFP39905 RNU7-62P-201ENST00000458856 62 ntBASIC1.89□□□□□ -2.11
GDNFP39905 AC008413.1-201ENST00000511864 177 ntBASIC1.89□□□□□ -2.11
GDNFP39905 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.89□□□□□ -2.11
GDNFP39905 MIR4796-201ENST00000580742 81 ntBASIC1.89□□□□□ -2.11
GDNFP39905 MIR5002-201ENST00000584713 97 ntBASIC1.89□□□□□ -2.11
GDNFP39905 AL357312.1-201ENST00000603879 298 ntBASIC1.89□□□□□ -2.11
GDNFP39905 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.89□□□□□ -2.11
GDNFP39905 Y_RNA.788-201ENST00000622394 112 ntBASIC1.89□□□□□ -2.11
GDNFP39905 SNORD36A-201ENST00000362874 73 ntBASIC1.88□□□□□ -2.11
GDNFP39905 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
GDNFP39905 RNA5SP126-201ENST00000365092 109 ntBASIC1.88□□□□□ -2.11
GDNFP39905 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
GDNFP39905 RNU6-788P-201ENST00000390967 104 ntBASIC1.88□□□□□ -2.11
GDNFP39905 AL356379.1-201ENST00000414105 126 ntBASIC1.88□□□□□ -2.11
GDNFP39905 AC245517.4-201ENST00000448601 281 ntBASIC1.88□□□□□ -2.11
GDNFP39905 MIR4536-1-201ENST00000583537 88 ntBASIC1.88□□□□□ -2.11
GDNFP39905 GHRLOS.1-201ENST00000610995 70 ntBASIC1.88□□□□□ -2.11
GDNFP39905 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
GDNFP39905 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
GDNFP39905 RNU6-811P-201ENST00000384069 107 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RNA5SP292-201ENST00000390974 118 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RNA5SP212-201ENST00000391223 107 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RN7SL429P-201ENST00000479090 223 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RN7SL489P-201ENST00000486185 223 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RN7SL327P-201ENST00000488659 223 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RNA5SP24-201ENST00000516478 95 ntBASIC1.87□□□□□ -2.11
GDNFP39905 MIR2115-201ENST00000516657 100 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
GDNFP39905 MIR4298-201ENST00000584380 73 ntBASIC1.87□□□□□ -2.11
GDNFP39905 RN7SL853P-201ENST00000617250 223 ntBASIC1.87□□□□□ -2.11
GDNFP39905 MIR6516-201ENST00000630554 81 ntBASIC1.87□□□□□ -2.11
GDNFP39905 AC008163.1-202ENST00000636004 2889 ntBASIC1.86□□□□□ -2.11
GDNFP39905 SNORA63.2-201ENST00000362603 126 ntBASIC1.86□□□□□ -2.11
GDNFP39905 Y_RNA.545-201ENST00000384652 105 ntBASIC1.86□□□□□ -2.11
GDNFP39905 RNU6-243P-201ENST00000391140 107 ntBASIC1.86□□□□□ -2.11
GDNFP39905 RNU6-1254P-201ENST00000391266 104 ntBASIC1.86□□□□□ -2.11
GDNFP39905 Z98742.3-201ENST00000418637 326 ntBASIC1.86□□□□□ -2.11
GDNFP39905 RNU6-531P-201ENST00000516694 104 ntBASIC1.86□□□□□ -2.11
GDNFP39905 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
GDNFP39905 SNORA77B-201ENST00000578179 125 ntBASIC1.86□□□□□ -2.11
GDNFP39905 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
GDNFP39905 RNU6-161P-201ENST00000363051 106 ntBASIC1.85□□□□□ -2.11
GDNFP39905 RNU6-654P-201ENST00000364373 107 ntBASIC1.85□□□□□ -2.11
GDNFP39905 MIR221-201ENST00000385135 110 ntBASIC1.85□□□□□ -2.11
GDNFP39905 MT-TN-201ENST00000387400 73 ntBASIC1.85□□□□□ -2.11
GDNFP39905 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
GDNFP39905 MIR1185-1-201ENST00000408598 86 ntBASIC1.85□□□□□ -2.11
GDNFP39905 RNA5SP95-201ENST00000410319 137 ntBASIC1.85□□□□□ -2.11
GDNFP39905 RNU7-106P-201ENST00000459514 67 ntBASIC1.85□□□□□ -2.11
GDNFP39905 RPL30P7-201ENST00000479312 323 ntBASIC1.85□□□□□ -2.11
GDNFP39905 AC004223.1-201ENST00000479840 271 ntBASIC1.85□□□□□ -2.11
GDNFP39905 SNORA25.16-201ENST00000516741 121 ntBASIC1.85□□□□□ -2.11
GDNFP39905 MIR4491-201ENST00000581087 68 ntBASIC1.85□□□□□ -2.11
GDNFP39905 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
GDNFP39905 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
GDNFP39905 MIRLET7A1-201ENST00000362295 80 ntBASIC1.84□□□□□ -2.11
GDNFP39905 RNU6-686P-201ENST00000364839 107 ntBASIC1.84□□□□□ -2.11
GDNFP39905 RNU6-132P-201ENST00000383863 107 ntBASIC1.84□□□□□ -2.11
GDNFP39905 MT-TF-201ENST00000387314 71 ntBASIC1.84□□□□□ -2.11
GDNFP39905 SNORA48.3-201ENST00000391081 134 ntBASIC1.84□□□□□ -2.11
GDNFP39905 SCARNA18B-201ENST00000458806 135 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms