Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-1237P-201ENST00000384777 107 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 SNORD111-201ENST00000408139 94 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-447P-201ENST00000410293 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-1118P-201ENST00000410382 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-1076P-201ENST00000410397 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-355P-201ENST00000410427 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-791P-201ENST00000410467 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-705P-201ENST00000410601 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-1100P-201ENST00000410691 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-860P-201ENST00000410860 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-1217P-201ENST00000411276 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 RNU6-785P-201ENST00000411324 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 AL035461.1-201ENST00000421490 332 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 U6.90-201ENST00000614007 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 MIR6740-201ENST00000618268 113 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 AC012676.2-201ENST00000619258 186 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 U6.70-201ENST00000620287 104 ntBASIC1.34□□□□□ -2.19
SLC6A4P31645 SNORA63.5-201ENST00000363548 123 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 RNU6-1107P-201ENST00000364817 104 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 RNU6-949P-201ENST00000384040 107 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 SNORA2B-201ENST00000384583 137 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 RPL39P25-201ENST00000449384 154 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.33□□□□□ -2.2
SLC6A4P31645 AL035470.1-201ENST00000622571 220 ntBASIC1.33□□□□□ -2.2
SLC6A4P31645 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SLC6A4P31645 Y_RNA.323-201ENST00000365157 109 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 RNU6-616P-201ENST00000384353 107 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 RNY4P18-201ENST00000391107 89 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 MIR1270-201ENST00000459320 83 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 RNA5SP480-201ENST00000516840 109 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 RNU6-94P-201ENST00000607728 107 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 AC106800.4-201ENST00000614905 153 ntBASIC1.32□□□□□ -2.2
SLC6A4P31645 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SLC6A4P31645 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
SLC6A4P31645 MIR30D-201ENST00000362283 70 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 RNU6-363P-201ENST00000362895 105 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 RNY1P13-201ENST00000365030 105 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 Y_RNA.549-201ENST00000384657 102 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 RNU6-816P-201ENST00000390914 107 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 RNU6-1268P-201ENST00000391214 107 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 RNU6-1239P-201ENST00000391310 107 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 AC036111.3-201ENST00000526389 112 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 AC068339.1-201ENST00000526965 141 ntBASIC1.31□□□□□ -2.2
SLC6A4P31645 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC6A4P31645 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SLC6A4P31645 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SLC6A4P31645 RNU6-755P-201ENST00000364400 103 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 RNU4-67P-201ENST00000364569 141 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 SNORD115-35-201ENST00000365122 82 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 RNU6-53P-201ENST00000365367 106 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 RNA5SP95-201ENST00000410319 137 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 RNU7-2P-201ENST00000516096 62 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 RNU7-137P-201ENST00000516788 62 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 MIR5009-201ENST00000578736 100 ntBASIC1.3□□□□□ -2.2
SLC6A4P31645 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
SLC6A4P31645 RNU6-409P-201ENST00000384114 104 ntBASIC1.29□□□□□ -2.2
SLC6A4P31645 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SLC6A4P31645 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.29□□□□□ -2.2
SLC6A4P31645 SNORD67.1-201ENST00000516618 108 ntBASIC1.29□□□□□ -2.2
SLC6A4P31645 Y_RNA.773-201ENST00000607168 90 ntBASIC1.29□□□□□ -2.2
SLC6A4P31645 Y_RNA.81-201ENST00000362997 102 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 Y_RNA.155-201ENST00000363632 101 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 U8.6-201ENST00000364939 135 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 SNORA22-201ENST00000383907 134 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 RNU6-1014P-201ENST00000383940 103 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 MIR206-201ENST00000384872 86 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 RNU6-733P-201ENST00000410759 104 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 RNU6-1018P-201ENST00000516577 106 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 MIR1255B1-201ENST00000636325 63 ntBASIC1.28□□□□□ -2.2
SLC6A4P31645 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.21
SLC6A4P31645 AC008163.1-202ENST00000636004 2889 ntBASIC1.27□□□□□ -2.21
SLC6A4P31645 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
SLC6A4P31645 MIR1302-5-201ENST00000408164 150 ntBASIC1.27□□□□□ -2.21
SLC6A4P31645 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
SLC6A4P31645 AC133485.1-201ENST00000567176 124 ntBASIC1.27□□□□□ -2.21
SLC6A4P31645 Y_RNA.98-201ENST00000363109 102 ntBASIC1.26□□□□□ -2.21
SLC6A4P31645 RNU6-1113P-201ENST00000384348 107 ntBASIC1.26□□□□□ -2.21
SLC6A4P31645 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.26□□□□□ -2.21
SLC6A4P31645 RNU6-521P-201ENST00000516663 105 ntBASIC1.26□□□□□ -2.21
SLC6A4P31645 AC022709.1-201ENST00000615967 87 ntBASIC1.26□□□□□ -2.21
SLC6A4P31645 AL391516.1-201ENST00000554380 2449 ntBASIC1.26□□□□□ -2.21
SLC6A4P31645 SNORD114-26-201ENST00000363543 72 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 RNU6-865P-201ENST00000364772 107 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 RNU6-934P-201ENST00000365154 107 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 RNU6-44P-201ENST00000384045 107 ntBASIC1.25□□□□□ -2.21
SLC6A4P31645 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms