Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CNGA1P29973 MIR539-201ENST00000365690 78 ntBASIC1.18□□□□□ -2.22
CNGA1P29973 SNORA22-201ENST00000383907 134 ntBASIC1.18□□□□□ -2.22
CNGA1P29973 SNORA32-201ENST00000384072 121 ntBASIC1.18□□□□□ -2.22
CNGA1P29973 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
CNGA1P29973 RNU4-69P-201ENST00000410677 143 ntBASIC1.18□□□□□ -2.22
CNGA1P29973 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.18□□□□□ -2.22
CNGA1P29973 RNU6-977P-201ENST00000516411 103 ntBASIC1.18□□□□□ -2.22
CNGA1P29973 MIR5000-201ENST00000577717 103 ntBASIC1.18□□□□□ -2.22
CNGA1P29973 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.18□□□□□ -2.22
CNGA1P29973 RNU6-1104P-201ENST00000384723 104 ntBASIC1.17□□□□□ -2.22
CNGA1P29973 MIR125B2-201ENST00000385128 89 ntBASIC1.17□□□□□ -2.22
CNGA1P29973 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
CNGA1P29973 U8.15-201ENST00000390947 134 ntBASIC1.17□□□□□ -2.22
CNGA1P29973 RPL39P25-201ENST00000449384 154 ntBASIC1.17□□□□□ -2.22
CNGA1P29973 MIR1270-201ENST00000459320 83 ntBASIC1.17□□□□□ -2.22
CNGA1P29973 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.17□□□□□ -2.22
CNGA1P29973 MIR373-201ENST00000362273 69 ntBASIC1.16□□□□□ -2.22
CNGA1P29973 RNU1-36P-201ENST00000365130 165 ntBASIC1.16□□□□□ -2.22
CNGA1P29973 RNA5SP136-201ENST00000410906 107 ntBASIC1.16□□□□□ -2.22
CNGA1P29973 AC096949.1-201ENST00000412047 152 ntBASIC1.16□□□□□ -2.22
CNGA1P29973 SUMO1P3-201ENST00000439961 304 ntBASIC1.16□□□□□ -2.22
CNGA1P29973 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CNGA1P29973 RNU6-235P-201ENST00000362644 107 ntBASIC1.15□□□□□ -2.23
CNGA1P29973 RNY1P4-201ENST00000384595 115 ntBASIC1.15□□□□□ -2.23
CNGA1P29973 MIR520F-201ENST00000384824 87 ntBASIC1.15□□□□□ -2.23
CNGA1P29973 MIR938-201ENST00000401216 83 ntBASIC1.15□□□□□ -2.23
CNGA1P29973 RNU6-781P-201ENST00000516377 101 ntBASIC1.15□□□□□ -2.23
CNGA1P29973 RNU6-971P-201ENST00000516920 106 ntBASIC1.15□□□□□ -2.23
CNGA1P29973 MIRLET7F2-201ENST00000385277 83 ntBASIC1.14□□□□□ -2.23
CNGA1P29973 SNORD93-201ENST00000408813 74 ntBASIC1.14□□□□□ -2.23
CNGA1P29973 RNU7-56P-201ENST00000458744 62 ntBASIC1.14□□□□□ -2.23
CNGA1P29973 RNU6-1211P-201ENST00000459179 105 ntBASIC1.14□□□□□ -2.23
CNGA1P29973 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
CNGA1P29973 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
CNGA1P29973 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
CNGA1P29973 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
CNGA1P29973 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CNGA1P29973 COX6CP6-201ENST00000490840 228 ntBASIC1.13□□□□□ -2.23
CNGA1P29973 CYP3A137P-201ENST00000562436 69 ntBASIC1.13□□□□□ -2.23
CNGA1P29973 SNORD92-201ENST00000585078 85 ntBASIC1.13□□□□□ -2.23
CNGA1P29973 AL353765.1-201ENST00000605514 183 ntBASIC1.13□□□□□ -2.23
CNGA1P29973 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
CNGA1P29973 SNORD58C-201ENST00000365223 64 ntBASIC1.12□□□□□ -2.23
CNGA1P29973 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CNGA1P29973 MIR1263-201ENST00000408324 86 ntBASIC1.12□□□□□ -2.23
CNGA1P29973 RNU7-156P-201ENST00000517214 74 ntBASIC1.12□□□□□ -2.23
CNGA1P29973 Y_RNA.198-201ENST00000364013 98 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 MIR216A-201ENST00000385063 110 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 MIR520H-201ENST00000385126 88 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 MT-TI-201ENST00000387365 69 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 Y_RNA.588-201ENST00000391254 102 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 AL603908.1-201ENST00000406098 201 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 RNU6-772P-201ENST00000516042 105 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 SNORD67.1-201ENST00000516618 108 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 RNU7-137P-201ENST00000516788 62 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 RN7SL793P-201ENST00000583259 296 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 AL359881.1-201ENST00000602916 267 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 AL589743.1-201ENST00000551932 2712 ntBASIC1.11□□□□□ -2.23
CNGA1P29973 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CNGA1P29973 RNU6-364P-201ENST00000384387 107 ntBASIC1.1□□□□□ -2.23
CNGA1P29973 MIR608-201ENST00000384820 100 ntBASIC1.1□□□□□ -2.23
CNGA1P29973 SNORD77B-201ENST00000391112 67 ntBASIC1.1□□□□□ -2.23
CNGA1P29973 RNU4-83P-201ENST00000410863 133 ntBASIC1.1□□□□□ -2.23
CNGA1P29973 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
CNGA1P29973 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
CNGA1P29973 MIR8066-201ENST00000617280 78 ntBASIC1.1□□□□□ -2.23
CNGA1P29973 SNORD114-10-201ENST00000363409 72 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 Y_RNA.213-201ENST00000364178 111 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 RNU6-80P-201ENST00000384195 107 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 Y_RNA.528-201ENST00000384575 108 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CNGA1P29973 RNU1-119P-201ENST00000391122 165 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
CNGA1P29973 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 ACA64.5-201ENST00000516207 127 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 RNU6-1061P-201ENST00000516530 99 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 MIR4491-201ENST00000581087 68 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 MIR3163-201ENST00000581592 73 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.09□□□□□ -2.23
CNGA1P29973 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CNGA1P29973 Y_RNA.42-201ENST00000362660 108 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-447P-201ENST00000410293 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-1118P-201ENST00000410382 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-1076P-201ENST00000410397 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-355P-201ENST00000410427 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-791P-201ENST00000410467 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-705P-201ENST00000410601 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-1100P-201ENST00000410691 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-860P-201ENST00000410860 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-1217P-201ENST00000411276 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 RNU6-785P-201ENST00000411324 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 AC008608.1-201ENST00000603910 127 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 AC025166.1-201ENST00000612411 163 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 U6.90-201ENST00000614007 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 U6.70-201ENST00000620287 104 ntBASIC1.08□□□□□ -2.24
CNGA1P29973 Y_RNA.218-201ENST00000364218 104 ntBASIC1.07□□□□□ -2.24
CNGA1P29973 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms