Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 Y_RNA.448-201ENST00000384185 108 ntBASIC2.39□□□□□ -2.03
RXRBP28702 Y_RNA.607-201ENST00000410597 98 ntBASIC2.39□□□□□ -2.03
RXRBP28702 snoU13.27-201ENST00000459278 104 ntBASIC2.39□□□□□ -2.03
RXRBP28702 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
RXRBP28702 RNU7-79P-201ENST00000516082 62 ntBASIC2.39□□□□□ -2.03
RXRBP28702 RNU7-137P-201ENST00000516788 62 ntBASIC2.39□□□□□ -2.03
RXRBP28702 AC019288.1-201ENST00000557918 224 ntBASIC2.39□□□□□ -2.03
RXRBP28702 MIR4709-201ENST00000577272 72 ntBASIC2.39□□□□□ -2.03
RXRBP28702 MIR5002-201ENST00000584713 97 ntBASIC2.39□□□□□ -2.03
RXRBP28702 SNORD14A-201ENST00000606526 91 ntBASIC2.39□□□□□ -2.03
RXRBP28702 MIR424-201ENST00000362227 98 ntBASIC2.38□□□□□ -2.03
RXRBP28702 Y_RNA.173-201ENST00000363776 113 ntBASIC2.38□□□□□ -2.03
RXRBP28702 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
RXRBP28702 MIR548G-201ENST00000408442 89 ntBASIC2.38□□□□□ -2.03
RXRBP28702 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
RXRBP28702 Y_RNA.316-201ENST00000365118 111 ntBASIC2.37□□□□□ -2.03
RXRBP28702 Y_RNA.567-201ENST00000384736 106 ntBASIC2.37□□□□□ -2.03
RXRBP28702 RPS29P28-201ENST00000446439 141 ntBASIC2.37□□□□□ -2.03
RXRBP28702 RNU6-917P-201ENST00000516294 104 ntBASIC2.37□□□□□ -2.03
RXRBP28702 AL645939.4-201ENST00000604495 135 ntBASIC2.37□□□□□ -2.03
RXRBP28702 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.37□□□□□ -2.03
RXRBP28702 AC105081.1-201ENST00000617727 106 ntBASIC2.37□□□□□ -2.03
RXRBP28702 Y_RNA.30-201ENST00000362572 97 ntBASIC2.36□□□□□ -2.03
RXRBP28702 SNORD114-10-201ENST00000363409 72 ntBASIC2.36□□□□□ -2.03
RXRBP28702 RNU2-7P-201ENST00000410794 178 ntBASIC2.36□□□□□ -2.03
RXRBP28702 RNU1-98P-201ENST00000458992 160 ntBASIC2.36□□□□□ -2.03
RXRBP28702 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.36□□□□□ -2.03
RXRBP28702 AC008133.2-201ENST00000624540 351 ntBASIC2.36□□□□□ -2.03
RXRBP28702 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RXRBP28702 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RXRBP28702 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
RXRBP28702 RNU6-776P-201ENST00000364403 104 ntBASIC2.35□□□□□ -2.03
RXRBP28702 RNU6-1022P-201ENST00000365049 104 ntBASIC2.35□□□□□ -2.03
RXRBP28702 RNA5SP37-201ENST00000365420 130 ntBASIC2.35□□□□□ -2.03
RXRBP28702 RNU6-524P-201ENST00000384270 107 ntBASIC2.35□□□□□ -2.03
RXRBP28702 RNU6-1086P-201ENST00000410930 100 ntBASIC2.35□□□□□ -2.03
RXRBP28702 AL513043.2-201ENST00000573941 143 ntBASIC2.35□□□□□ -2.03
RXRBP28702 MIR548AO-201ENST00000579992 96 ntBASIC2.35□□□□□ -2.03
RXRBP28702 MIR4764-201ENST00000580680 88 ntBASIC2.35□□□□□ -2.03
RXRBP28702 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.35□□□□□ -2.03
RXRBP28702 RNU1-42P-201ENST00000364033 160 ntBASIC2.34□□□□□ -2.03
RXRBP28702 RNA5SP100-201ENST00000410903 110 ntBASIC2.34□□□□□ -2.03
RXRBP28702 RNA5SP59-201ENST00000410922 110 ntBASIC2.34□□□□□ -2.03
RXRBP28702 RNU7-43P-201ENST00000516554 64 ntBASIC2.34□□□□□ -2.03
RXRBP28702 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
RXRBP28702 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.34□□□□□ -2.03
RXRBP28702 RNU6-90P-201ENST00000606352 106 ntBASIC2.34□□□□□ -2.03
RXRBP28702 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.34□□□□□ -2.03
RXRBP28702 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.34□□□□□ -2.03
RXRBP28702 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.34□□□□□ -2.03
RXRBP28702 RNU6-865P-201ENST00000364772 107 ntBASIC2.33□□□□□ -2.04
RXRBP28702 RNY1P13-201ENST00000365030 105 ntBASIC2.33□□□□□ -2.04
RXRBP28702 RNU6-1067P-201ENST00000384752 107 ntBASIC2.33□□□□□ -2.04
RXRBP28702 RPL31P63-201ENST00000422565 375 ntBASIC2.33□□□□□ -2.04
RXRBP28702 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
RXRBP28702 AL161932.1-201ENST00000437408 146 ntBASIC2.33□□□□□ -2.04
RXRBP28702 RNU2-19P-201ENST00000517288 84 ntBASIC2.33□□□□□ -2.04
RXRBP28702 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.33□□□□□ -2.04
RXRBP28702 SNORD53B-201ENST00000577887 78 ntBASIC2.33□□□□□ -2.04
RXRBP28702 AL157834.3-201ENST00000615543 103 ntBASIC2.33□□□□□ -2.04
RXRBP28702 SNORA2B-201ENST00000384583 137 ntBASIC2.32□□□□□ -2.04
RXRBP28702 MIR181B2-201ENST00000385004 89 ntBASIC2.32□□□□□ -2.04
RXRBP28702 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
RXRBP28702 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
RXRBP28702 RNU7-48P-201ENST00000458875 63 ntBASIC2.32□□□□□ -2.04
RXRBP28702 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
RXRBP28702 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.32□□□□□ -2.04
RXRBP28702 AC012676.2-201ENST00000619258 186 ntBASIC2.32□□□□□ -2.04
RXRBP28702 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.32□□□□□ -2.04
RXRBP28702 MIR96-201ENST00000362288 78 ntBASIC2.31□□□□□ -2.04
RXRBP28702 RNU6-203P-201ENST00000384038 104 ntBASIC2.31□□□□□ -2.04
RXRBP28702 MIR4662A-201ENST00000637499 67 ntBASIC2.31□□□□□ -2.04
RXRBP28702 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNA5SP133-201ENST00000363368 119 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-53P-201ENST00000365367 106 ntBASIC2.3□□□□□ -2.04
RXRBP28702 MIR194-1-201ENST00000384892 85 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-447P-201ENST00000410293 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-1118P-201ENST00000410382 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-1076P-201ENST00000410397 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-355P-201ENST00000410427 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-791P-201ENST00000410467 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-705P-201ENST00000410601 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-1100P-201ENST00000410691 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-860P-201ENST00000410860 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-1217P-201ENST00000411276 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU6-785P-201ENST00000411324 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 SPINT5P-201ENST00000448174 155 ntBASIC2.3□□□□□ -2.04
RXRBP28702 AC139453.2-201ENST00000487255 133 ntBASIC2.3□□□□□ -2.04
RXRBP28702 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
RXRBP28702 MIR4712-201ENST00000583750 82 ntBASIC2.3□□□□□ -2.04
RXRBP28702 U6.90-201ENST00000614007 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 U6.70-201ENST00000620287 104 ntBASIC2.3□□□□□ -2.04
RXRBP28702 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RXRBP28702 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RXRBP28702 AC087499.7-201ENST00000441958 109 ntBASIC2.29□□□□□ -2.04
RXRBP28702 RNU7-41P-201ENST00000515917 61 ntBASIC2.29□□□□□ -2.04
RXRBP28702 SNORA31.17-201ENST00000516953 127 ntBASIC2.29□□□□□ -2.04
RXRBP28702 RNU6-1223P-201ENST00000517124 104 ntBASIC2.29□□□□□ -2.04
RXRBP28702 MIR4421-201ENST00000578133 69 ntBASIC2.29□□□□□ -2.04
RXRBP28702 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms