Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 Y_RNA.35-201ENST00000362601 101 ntBASIC1.43□□□□□ -2.18
VAMP1P23763 RNU6-1290P-201ENST00000362957 109 ntBASIC1.43□□□□□ -2.18
VAMP1P23763 SNORD38.2-201ENST00000384470 69 ntBASIC1.43□□□□□ -2.18
VAMP1P23763 RNU6-733P-201ENST00000410759 104 ntBASIC1.43□□□□□ -2.18
VAMP1P23763 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VAMP1P23763 MIR4491-201ENST00000581087 68 ntBASIC1.43□□□□□ -2.18
VAMP1P23763 MIR4804-201ENST00000581683 73 ntBASIC1.43□□□□□ -2.18
VAMP1P23763 MIR4661-201ENST00000582720 75 ntBASIC1.43□□□□□ -2.18
VAMP1P23763 RNU6-363P-201ENST00000362895 105 ntBASIC1.42□□□□□ -2.18
VAMP1P23763 RNU4-58P-201ENST00000363192 141 ntBASIC1.42□□□□□ -2.18
VAMP1P23763 MIR520H-201ENST00000385126 88 ntBASIC1.42□□□□□ -2.18
VAMP1P23763 AC003989.2-201ENST00000440224 169 ntBASIC1.42□□□□□ -2.18
VAMP1P23763 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.42□□□□□ -2.18
VAMP1P23763 AL035470.1-201ENST00000622571 220 ntBASIC1.42□□□□□ -2.18
VAMP1P23763 AP001362.1-201ENST00000625165 124 ntBASIC1.42□□□□□ -2.18
VAMP1P23763 Y_RNA.328-201ENST00000365208 113 ntBASIC1.41□□□□□ -2.18
VAMP1P23763 Y_RNA.549-201ENST00000384657 102 ntBASIC1.41□□□□□ -2.18
VAMP1P23763 SNORD105-201ENST00000386910 85 ntBASIC1.41□□□□□ -2.18
VAMP1P23763 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.41□□□□□ -2.18
VAMP1P23763 MIR1261-201ENST00000408659 82 ntBASIC1.41□□□□□ -2.18
VAMP1P23763 snoU13.15-201ENST00000459407 104 ntBASIC1.41□□□□□ -2.18
VAMP1P23763 MIR101-2-201ENST00000362195 79 ntBASIC1.4□□□□□ -2.19
VAMP1P23763 Y_RNA.85-201ENST00000363014 111 ntBASIC1.4□□□□□ -2.19
VAMP1P23763 MIR3124-201ENST00000582636 67 ntBASIC1.4□□□□□ -2.19
VAMP1P23763 MIR7843-201ENST00000622274 79 ntBASIC1.4□□□□□ -2.19
VAMP1P23763 Y_RNA.13-201ENST00000362403 112 ntBASIC1.39□□□□□ -2.19
VAMP1P23763 RNY1P2-201ENST00000364820 117 ntBASIC1.39□□□□□ -2.19
VAMP1P23763 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
VAMP1P23763 RNU7-102P-201ENST00000458948 62 ntBASIC1.39□□□□□ -2.19
VAMP1P23763 RMST_2.1-201ENST00000617263 136 ntBASIC1.39□□□□□ -2.19
VAMP1P23763 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VAMP1P23763 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VAMP1P23763 Y_RNA.119-201ENST00000363301 96 ntBASIC1.38□□□□□ -2.19
VAMP1P23763 UBL5P1-201ENST00000507979 193 ntBASIC1.38□□□□□ -2.19
VAMP1P23763 SNORA25.16-201ENST00000516741 121 ntBASIC1.38□□□□□ -2.19
VAMP1P23763 AC068339.1-201ENST00000526965 141 ntBASIC1.38□□□□□ -2.19
VAMP1P23763 MIR4500-201ENST00000579472 76 ntBASIC1.38□□□□□ -2.19
VAMP1P23763 MIR4524B-201ENST00000581569 115 ntBASIC1.38□□□□□ -2.19
VAMP1P23763 MIR6082-201ENST00000613604 109 ntBASIC1.38□□□□□ -2.19
VAMP1P23763 RNU6-1325P-201ENST00000364905 105 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 RNU6-482P-201ENST00000391068 107 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 Z98742.3-201ENST00000418637 326 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.37□□□□□ -2.19
VAMP1P23763 RNA5SP255-201ENST00000516370 107 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 Y_RNA.697-201ENST00000516776 113 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 AC138749.4-201ENST00000563970 127 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.37□□□□□ -2.19
VAMP1P23763 Y_RNA.281-201ENST00000364774 94 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 MIR9-3-201ENST00000385084 90 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 RNU7-56P-201ENST00000458744 62 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 snoU13.23-201ENST00000458863 104 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.36□□□□□ -2.19
VAMP1P23763 RNU6-1194P-201ENST00000516208 104 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 RNU6-531P-201ENST00000516694 104 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 MTND5P40-201ENST00000559945 246 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.36□□□□□ -2.19
VAMP1P23763 SNORD92-201ENST00000585078 85 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 AC096720.1-201ENST00000604441 183 ntBASIC1.36□□□□□ -2.19
VAMP1P23763 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.36□□□□□ -2.19
VAMP1P23763 RNU6-1107P-201ENST00000364817 104 ntBASIC1.35□□□□□ -2.19
VAMP1P23763 Y_RNA.588-201ENST00000391254 102 ntBASIC1.35□□□□□ -2.19
VAMP1P23763 MIR5009-201ENST00000578736 100 ntBASIC1.35□□□□□ -2.19
VAMP1P23763 U8.6-201ENST00000364939 135 ntBASIC1.34□□□□□ -2.19
VAMP1P23763 SNORA3.2-201ENST00000408221 125 ntBASIC1.34□□□□□ -2.19
VAMP1P23763 RN7SKP223-201ENST00000410582 62 ntBASIC1.34□□□□□ -2.19
VAMP1P23763 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
VAMP1P23763 MIR376B-201ENST00000614515 100 ntBASIC1.34□□□□□ -2.19
VAMP1P23763 RNU6-369P-201ENST00000362515 102 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 SNORD114-1-201ENST00000362705 72 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 MIR1302-5-201ENST00000408164 150 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.33□□□□□ -2.2
VAMP1P23763 AC108729.3-201ENST00000513484 108 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 RNA5SP182-201ENST00000516064 82 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 RNU6-1018P-201ENST00000516577 106 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 RNU6-765P-201ENST00000516916 99 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
VAMP1P23763 Y_RNA.116-201ENST00000363292 103 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 RNA5SP117-201ENST00000365294 118 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 Y_RNA.360-201ENST00000365512 102 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 RNU6-429P-201ENST00000384582 108 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 MIR34C-201ENST00000384831 77 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 MIR605-201ENST00000385078 83 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 SNORD99-201ENST00000408612 74 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 AC108210.2-201ENST00000503681 201 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 AC090897.1-201ENST00000580909 226 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 AC013244.2-201ENST00000603396 103 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 AC084768.2-201ENST00000622736 221 ntBASIC1.32□□□□□ -2.2
VAMP1P23763 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
VAMP1P23763 RNU6-448P-201ENST00000517052 107 ntBASIC1.31□□□□□ -2.2
VAMP1P23763 AC011195.1-201ENST00000578177 177 ntBASIC1.31□□□□□ -2.2
VAMP1P23763 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
VAMP1P23763 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.31□□□□□ -2.2
VAMP1P23763 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
VAMP1P23763 RNU4-36P-201ENST00000364294 144 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 RNU6-679P-201ENST00000391003 106 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 RNU6-1307P-201ENST00000391012 103 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 SPINT5P-201ENST00000448174 155 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 393.6 ms