Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 SNORD115-20-201ENST00000365099 82 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 RNU6-187P-201ENST00000384139 106 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 MIR548H3-201ENST00000408771 118 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 MTND1P19-201ENST00000511780 315 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 RNY3P16-201ENST00000516338 101 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 RNU6-531P-201ENST00000516694 104 ntBASIC-0.04□□□□□ -2.42
BDNFP23560 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.04□□□□□ -2.42
BDNFP23560 RNA5SP133-201ENST00000363368 119 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 MIR760-201ENST00000390220 80 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
BDNFP23560 RNU6-493P-201ENST00000391321 108 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 AL022718.1-201ENST00000412004 84 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.05□□□□□ -2.42
BDNFP23560 RNU7-113P-201ENST00000459273 62 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.05□□□□□ -2.42
BDNFP23560 RNA5SP245-201ENST00000364239 121 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 SNORA2A-201ENST00000383885 135 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 RNU6-127P-201ENST00000390897 107 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 SNORD127-201ENST00000458892 86 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 RNA5SP33-201ENST00000516687 98 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 AC141557.1-201ENST00000540982 400 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 AL117187.1-201ENST00000555482 181 ntBASIC-0.06□□□□□ -2.42
BDNFP23560 MIR101-2-201ENST00000362195 79 ntBASIC-0.07□□□□□ -2.42
BDNFP23560 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.07□□□□□ -2.42
BDNFP23560 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.07□□□□□ -2.42
BDNFP23560 RNU6-275P-201ENST00000364910 107 ntBASIC-0.07□□□□□ -2.42
BDNFP23560 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.07□□□□□ -2.42
BDNFP23560 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
BDNFP23560 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.07□□□□□ -2.42
BDNFP23560 MIR4743-201ENST00000584576 69 ntBASIC-0.07□□□□□ -2.42
BDNFP23560 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 SNORA63.5-201ENST00000363548 123 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 SNORD58.1-201ENST00000391313 66 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 MIR892B-201ENST00000401279 77 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 RNU2-38P-201ENST00000410856 79 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 RNU7-129P-201ENST00000516128 62 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 RNA5SP395-201ENST00000516567 118 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
BDNFP23560 AC138749.4-201ENST00000563970 127 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 MIR4308-201ENST00000580634 81 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 AL360085.1-201ENST00000604713 532 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 AC098479.1-201ENST00000609225 154 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 U6.109-201ENST00000636749 87 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 MIR6759-201ENST00000638110 65 ntBASIC-0.08□□□□□ -2.42
BDNFP23560 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 SNORD114-10-201ENST00000363409 72 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 SNORD115-24-201ENST00000363528 82 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 MIR606-201ENST00000384851 96 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 AC244505.6-201ENST00000452829 130 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 RPL39P34-201ENST00000477141 156 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 RNA5SP236-201ENST00000516169 116 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 RNU7-137P-201ENST00000516788 62 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.09□□□□□ -2.42
BDNFP23560 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 RNU6-726P-201ENST00000364680 107 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 RNU6-923P-201ENST00000364753 107 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 RNU6-702P-201ENST00000364982 107 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 SNORA32-201ENST00000384072 121 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 MIR643-201ENST00000385267 97 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 SNORD67.1-201ENST00000516618 108 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 RNU6-782P-201ENST00000516852 104 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 AC138869.1-201ENST00000568623 124 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 MIR4752-201ENST00000579672 72 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 AC008737.2-201ENST00000599446 118 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 RNU1-29P-201ENST00000606574 126 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 AC011603.4-201ENST00000611325 277 ntBASIC-0.1□□□□□ -2.43
BDNFP23560 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 MTND2P23-201ENST00000422990 651 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 MIR548H5-201ENST00000580314 60 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 MIR548AE2-201ENST00000583456 67 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 AL162376.1-201ENST00000624117 175 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 U6.106-201ENST00000636360 105 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 MIR499B-201ENST00000636498 73 ntBASIC-0.11□□□□□ -2.43
BDNFP23560 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.12□□□□□ -2.43
BDNFP23560 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms