Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SNORA40-201ENST00000388090 126 ntBASIC0.78□□□□□ -2.28
PCNAP12004 Y_RNA.617-201ENST00000410920 90 ntBASIC0.78□□□□□ -2.28
PCNAP12004 AL158147.1-201ENST00000443970 75 ntBASIC0.78□□□□□ -2.28
PCNAP12004 RNA5SP102-201ENST00000516865 106 ntBASIC0.78□□□□□ -2.28
PCNAP12004 SNORD92-201ENST00000585078 85 ntBASIC0.78□□□□□ -2.28
PCNAP12004 RNU6-647P-201ENST00000364243 107 ntBASIC0.77□□□□□ -2.29
PCNAP12004 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PCNAP12004 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-447P-201ENST00000410293 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-1118P-201ENST00000410382 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-1076P-201ENST00000410397 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-355P-201ENST00000410427 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-791P-201ENST00000410467 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-705P-201ENST00000410601 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU4-69P-201ENST00000410677 143 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-1100P-201ENST00000410691 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-860P-201ENST00000410860 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-1217P-201ENST00000411276 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-785P-201ENST00000411324 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
PCNAP12004 SNORA25.16-201ENST00000516741 121 ntBASIC0.77□□□□□ -2.29
PCNAP12004 RNU7-137P-201ENST00000516788 62 ntBASIC0.77□□□□□ -2.29
PCNAP12004 Y_RNA.703-201ENST00000516846 111 ntBASIC0.77□□□□□ -2.29
PCNAP12004 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.77□□□□□ -2.29
PCNAP12004 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.77□□□□□ -2.29
PCNAP12004 U6.90-201ENST00000614007 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 U6.70-201ENST00000620287 104 ntBASIC0.77□□□□□ -2.29
PCNAP12004 MIR96-201ENST00000362288 78 ntBASIC0.76□□□□□ -2.29
PCNAP12004 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
PCNAP12004 RNU6-1211P-201ENST00000459179 105 ntBASIC0.76□□□□□ -2.29
PCNAP12004 RNU6-971P-201ENST00000516920 106 ntBASIC0.76□□□□□ -2.29
PCNAP12004 TUG1_4.1-201ENST00000619464 181 ntBASIC0.76□□□□□ -2.29
PCNAP12004 MIR6767-201ENST00000637302 66 ntBASIC0.76□□□□□ -2.29
PCNAP12004 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
PCNAP12004 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.76□□□□□ -2.29
PCNAP12004 Y_RNA.42-201ENST00000362660 108 ntBASIC0.75□□□□□ -2.29
PCNAP12004 Y_RNA.586-201ENST00000391146 98 ntBASIC0.75□□□□□ -2.29
PCNAP12004 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
PCNAP12004 MIR3612-201ENST00000579753 87 ntBASIC0.75□□□□□ -2.29
PCNAP12004 MIR6082-201ENST00000613604 109 ntBASIC0.75□□□□□ -2.29
PCNAP12004 Y_RNA.525-201ENST00000384570 113 ntBASIC0.74□□□□□ -2.29
PCNAP12004 RNU6-735P-201ENST00000410612 107 ntBASIC0.74□□□□□ -2.29
PCNAP12004 RNU6-1061P-201ENST00000516530 99 ntBASIC0.74□□□□□ -2.29
PCNAP12004 AC090897.1-201ENST00000580909 226 ntBASIC0.74□□□□□ -2.29
PCNAP12004 U6.109-201ENST00000636749 87 ntBASIC0.74□□□□□ -2.29
PCNAP12004 RNA5SP133-201ENST00000363368 119 ntBASIC0.73□□□□□ -2.29
PCNAP12004 Y_RNA.299-201ENST00000364973 94 ntBASIC0.73□□□□□ -2.29
PCNAP12004 RNU6-746P-201ENST00000384112 109 ntBASIC0.73□□□□□ -2.29
PCNAP12004 RNU6-1307P-201ENST00000391012 103 ntBASIC0.73□□□□□ -2.29
PCNAP12004 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.73□□□□□ -2.29
PCNAP12004 RNU7-6P-201ENST00000516845 62 ntBASIC0.73□□□□□ -2.29
PCNAP12004 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
PCNAP12004 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
PCNAP12004 SNORA36.2-201ENST00000384004 127 ntBASIC0.72□□□□□ -2.29
PCNAP12004 RNU6-616P-201ENST00000384353 107 ntBASIC0.72□□□□□ -2.29
PCNAP12004 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
PCNAP12004 RNU7-107P-201ENST00000459121 61 ntBASIC0.72□□□□□ -2.29
PCNAP12004 AC138749.4-201ENST00000563970 127 ntBASIC0.72□□□□□ -2.29
PCNAP12004 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PCNAP12004 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
PCNAP12004 SNORD58C-201ENST00000365223 64 ntBASIC0.71□□□□□ -2.3
PCNAP12004 Y_RNA.528-201ENST00000384575 108 ntBASIC0.71□□□□□ -2.3
PCNAP12004 MIR206-201ENST00000384872 86 ntBASIC0.71□□□□□ -2.3
PCNAP12004 RNU6-1321P-201ENST00000390905 107 ntBASIC0.71□□□□□ -2.3
PCNAP12004 Y_RNA.630-201ENST00000411370 108 ntBASIC0.71□□□□□ -2.3
PCNAP12004 AC002350.1-201ENST00000490759 375 ntBASIC0.71□□□□□ -2.3
PCNAP12004 RNU6-531P-201ENST00000516694 104 ntBASIC0.71□□□□□ -2.3
PCNAP12004 RNU6-1234P-201ENST00000516877 103 ntBASIC0.71□□□□□ -2.3
PCNAP12004 RNU6-448P-201ENST00000517052 107 ntBASIC0.71□□□□□ -2.3
PCNAP12004 DEFB131E-201ENST00000532329 154 ntBASIC0.71□□□□□ -2.3
PCNAP12004 MTND5P34-201ENST00000568888 325 ntBASIC0.71□□□□□ -2.3
PCNAP12004 AC087741.2-201ENST00000619415 172 ntBASIC0.71□□□□□ -2.3
PCNAP12004 MIR18A-201ENST00000362310 71 ntBASIC0.7□□□□□ -2.3
PCNAP12004 SNORD114-10-201ENST00000363409 72 ntBASIC0.7□□□□□ -2.3
PCNAP12004 SNORD77B-201ENST00000391112 67 ntBASIC0.7□□□□□ -2.3
PCNAP12004 SNORD100-201ENST00000408573 76 ntBASIC0.7□□□□□ -2.3
PCNAP12004 RNU6-772P-201ENST00000516042 105 ntBASIC0.7□□□□□ -2.3
PCNAP12004 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
PCNAP12004 Y_RNA.773-201ENST00000607168 90 ntBASIC0.7□□□□□ -2.3
PCNAP12004 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
PCNAP12004 Y_RNA.198-201ENST00000364013 98 ntBASIC0.69□□□□□ -2.3
PCNAP12004 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
PCNAP12004 Y_RNA.448-201ENST00000384185 108 ntBASIC0.69□□□□□ -2.3
PCNAP12004 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
PCNAP12004 RNA5SP136-201ENST00000410906 107 ntBASIC0.69□□□□□ -2.3
PCNAP12004 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
PCNAP12004 AC025166.1-201ENST00000612411 163 ntBASIC0.69□□□□□ -2.3
PCNAP12004 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
PCNAP12004 Y_RNA.164-201ENST00000363709 102 ntBASIC0.68□□□□□ -2.3
PCNAP12004 RNU6-704P-201ENST00000364162 103 ntBASIC0.68□□□□□ -2.3
PCNAP12004 Y_RNA.213-201ENST00000364178 111 ntBASIC0.68□□□□□ -2.3
PCNAP12004 Y_RNA.218-201ENST00000364218 104 ntBASIC0.68□□□□□ -2.3
PCNAP12004 MIR613-201ENST00000385248 95 ntBASIC0.68□□□□□ -2.3
PCNAP12004 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
PCNAP12004 MIR3163-201ENST00000581592 73 ntBASIC0.68□□□□□ -2.3
PCNAP12004 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
PCNAP12004 Y_RNA.119-201ENST00000363301 96 ntBASIC0.67□□□□□ -2.3
PCNAP12004 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
PCNAP12004 MIRLET7F2-201ENST00000385277 83 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms