Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SNORD116-15-201ENST00000384445 92 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 Y_RNA.528-201ENST00000384575 108 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 SNORD116-19-201ENST00000384729 92 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 snoU13.2-201ENST00000459201 104 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 RNU7-113P-201ENST00000459273 62 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 MIR548AE2-201ENST00000583456 67 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 MIR4264-201ENST00000583520 66 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
HOXC4P09017 AC013244.2-201ENST00000603396 103 ntBASIC0.68□□□□□ -2.3
HOXC4P09017 MIR30D-201ENST00000362283 70 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 SNORD115-2-201ENST00000362842 82 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 Y_RNA.118-201ENST00000363300 101 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 SNORD115-20-201ENST00000365099 82 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 RNU6-22P-201ENST00000384355 107 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 MIR563-201ENST00000385080 79 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 MT-TN-201ENST00000387400 73 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 RNA5SP261-201ENST00000410536 106 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 SNORD83.1-201ENST00000411362 77 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
HOXC4P09017 RNU7-62P-201ENST00000458856 62 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 RNU7-90P-201ENST00000459216 62 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 AP000753.3-201ENST00000604083 169 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 AC025166.1-201ENST00000612411 163 ntBASIC0.67□□□□□ -2.3
HOXC4P09017 MTND5P18-201ENST00000445624 1801 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 Y_RNA.168-201ENST00000363740 102 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 SNORD113.3-201ENST00000364630 78 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 RNU6-1165P-201ENST00000410119 107 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 PSMC1P5-201ENST00000512850 177 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 RNU6-789P-201ENST00000517105 102 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 AL359881.1-201ENST00000602916 267 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 AL662814.1-201ENST00000617364 121 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 MIR6515-201ENST00000619843 57 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 MIR3914-2-201ENST00000637339 95 ntBASIC0.66□□□□□ -2.3
HOXC4P09017 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
HOXC4P09017 MIR377-201ENST00000362145 69 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 RNY1P13-201ENST00000365030 105 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 RNU6-1117P-201ENST00000384525 104 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 RNU6-1168P-201ENST00000390831 104 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 AC096949.1-201ENST00000412047 152 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 RNU7-79P-201ENST00000516082 62 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 SNORD33.1-201ENST00000516213 88 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 Y_RNA.712-201ENST00000517011 92 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 RNU7-35P-201ENST00000517174 62 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 AC141846.1-201ENST00000568348 142 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 AC020891.4-201ENST00000605745 93 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 Y_RNA.773-201ENST00000607168 90 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 AC087741.2-201ENST00000619415 172 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 MIR7111-201ENST00000619751 72 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 AL589743.1-201ENST00000551932 2712 ntBASIC0.65□□□□□ -2.31
HOXC4P09017 Y_RNA.198-201ENST00000364013 98 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 U8.15-201ENST00000390947 134 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNU6-1307P-201ENST00000391012 103 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 SNORD111-201ENST00000408139 94 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNA5SP237-201ENST00000410414 113 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNU4-69P-201ENST00000410677 143 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNA5SP136-201ENST00000410906 107 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNU6-893P-201ENST00000458841 100 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNU7-6P-201ENST00000516845 62 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.64□□□□□ -2.31
HOXC4P09017 RNU6-934P-201ENST00000365154 107 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 Y_RNA.353-201ENST00000365440 108 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 RNU6-616P-201ENST00000384353 107 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 MIR548A1-201ENST00000385041 97 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 MIR100-201ENST00000385259 80 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 RNU6-1086P-201ENST00000410930 100 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 AC008267.6-201ENST00000441664 139 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 SNORD67.1-201ENST00000516618 108 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 AC105081.1-201ENST00000617727 106 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 MIR1255B1-201ENST00000636325 63 ntBASIC0.63□□□□□ -2.31
HOXC4P09017 RNA5SP205-201ENST00000364653 136 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 Y_RNA.344-201ENST00000365381 112 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 Y_RNA.549-201ENST00000384657 102 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 RNU6-1154P-201ENST00000391001 104 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 RNU6-479P-201ENST00000516348 105 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 MIR4771-2-201ENST00000577758 74 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 MIR4771-1-201ENST00000582617 74 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
HOXC4P09017 Y_RNA.346-201ENST00000365385 112 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 RNU6-949P-201ENST00000384040 107 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 Y_RNA.563-201ENST00000384707 108 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 RNU2-51P-201ENST00000410708 197 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 Y_RNA.649-201ENST00000459077 103 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 RNU7-185P-201ENST00000459215 60 ntBASIC0.61□□□□□ -2.31
HOXC4P09017 RNU6-62P-201ENST00000516526 102 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms