Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC098479.1-201ENST00000609225 154 ntBASIC-0.34□□□□□ -2.46
MT-ND4P03905 MIR2909-201ENST00000617113 69 ntBASIC-0.34□□□□□ -2.46
MT-ND4P03905 AC067863.3-201ENST00000624172 122 ntBASIC-0.34□□□□□ -2.46
MT-ND4P03905 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 SNORD41.1-201ENST00000391000 69 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 AL022718.1-201ENST00000412004 84 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 SNORD4A-201ENST00000459174 72 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 MIR548H5-201ENST00000580314 60 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 AC105081.1-201ENST00000617727 106 ntBASIC-0.35□□□□□ -2.47
MT-ND4P03905 MIR335-201ENST00000362173 94 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 SNORD114-12-201ENST00000365400 75 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 MIR214-201ENST00000385214 110 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 RNU6-985P-201ENST00000410182 104 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 RNU2-60P-201ENST00000517290 128 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 AC020661.2-201ENST00000560114 134 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 MIR548AE2-201ENST00000583456 67 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.36□□□□□ -2.47
MT-ND4P03905 AC073869.9-201ENST00000641610 120 ntBASIC-0.36□□□□□ -2.47
MT-ND4P03905 SNORD114-10-201ENST00000363409 72 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 SNORA18.1-201ENST00000363418 128 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 RNU6-578P-201ENST00000390980 103 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 MIR4643-201ENST00000577473 78 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 AL670379.3-201ENST00000605040 251 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 AC011921.3-201ENST00000605540 361 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 MIR6514-201ENST00000622549 70 ntBASIC-0.37□□□□□ -2.47
MT-ND4P03905 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.38□□□□□ -2.47
MT-ND4P03905 RNU6-429P-201ENST00000384582 108 ntBASIC-0.38□□□□□ -2.47
MT-ND4P03905 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.38□□□□□ -2.47
MT-ND4P03905 RNU6-923P-201ENST00000364753 107 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 RNU6-46P-201ENST00000383860 107 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 RNU6-713P-201ENST00000384761 107 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 MIR106A-201ENST00000384870 81 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 SNORA75.1-201ENST00000391130 148 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 HMGN2P22-201ENST00000427588 175 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 TRAJ51-201ENST00000504127 63 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 RNY3P16-201ENST00000516338 101 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.39□□□□□ -2.47
MT-ND4P03905 AL356055.1-201ENST00000602528 446 ntBASIC-0.39□□□□□ -2.47
MT-ND4P03905 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 SNORA25.7-201ENST00000364375 127 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 RNU6-449P-201ENST00000383914 107 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 MIR635-201ENST00000384830 98 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 MIR599-201ENST00000385069 95 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 MT-TW-201ENST00000387382 68 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 SNORD110-201ENST00000408189 75 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 AC006210.1-201ENST00000424882 111 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 MIR1270-201ENST00000459320 83 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 RNU2-35P-201ENST00000516446 142 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 RNU2-4P-201ENST00000606190 192 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 RNU7-10P-201ENST00000607194 63 ntBASIC-0.4□□□□□ -2.47
MT-ND4P03905 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 RNU6-643P-201ENST00000384018 107 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 MIR329-2-201ENST00000385029 84 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 MTATP6P23-201ENST00000440153 476 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 CR383656.4-201ENST00000546909 122 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 NAMPTP3-201ENST00000569273 224 ntBASIC-0.41□□□□□ -2.48
MT-ND4P03905 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 RNU6-690P-201ENST00000365242 106 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 MIR876-201ENST00000401147 81 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 BX276092.1-201ENST00000427368 251 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 RNA5SP484-201ENST00000458857 111 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 RNA5SP236-201ENST00000516169 116 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 IGLVI-20-201ENST00000519296 130 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 MIR4500-201ENST00000579472 76 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.42□□□□□ -2.48
MT-ND4P03905 AL109933.3-201ENST00000619095 188 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 AC084368.1-201ENST00000620935 65 ntBASIC-0.42□□□□□ -2.48
MT-ND4P03905 SNORD114-31-201ENST00000363219 75 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 RNA5SP457-201ENST00000363657 124 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 RNU6-865P-201ENST00000364772 107 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 SNORA33.2-201ENST00000365413 134 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 RNU6-493P-201ENST00000391321 108 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 AC097635.1-201ENST00000450678 155 ntBASIC-0.43□□□□□ -2.48
MT-ND4P03905 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.44□□□□□ -2.48
MT-ND4P03905 RNU6-509P-201ENST00000363519 107 ntBASIC-0.44□□□□□ -2.48
MT-ND4P03905 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.44□□□□□ -2.48
MT-ND4P03905 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.44□□□□□ -2.48
MT-ND4P03905 MIR1302-6-201ENST00000408466 90 ntBASIC-0.44□□□□□ -2.48
MT-ND4P03905 RNU6-635P-201ENST00000516651 102 ntBASIC-0.44□□□□□ -2.48
MT-ND4P03905 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
MT-ND4P03905 MIR8062-201ENST00000621515 85 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms