Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC092634.7-201ENST00000621022 103 ntBASIC0.33□□□□□ -2.36
PGK1P00558 SNORA36.1-201ENST00000363424 132 ntBASIC0.32□□□□□ -2.36
PGK1P00558 RNY1P11-201ENST00000363759 113 ntBASIC0.32□□□□□ -2.36
PGK1P00558 RNU5E-9P-201ENST00000411164 104 ntBASIC0.32□□□□□ -2.36
PGK1P00558 MIR3678-201ENST00000578455 94 ntBASIC0.32□□□□□ -2.36
PGK1P00558 SNORA25.18-201ENST00000607153 114 ntBASIC0.32□□□□□ -2.36
PGK1P00558 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.32□□□□□ -2.36
PGK1P00558 RNU6-403P-201ENST00000363163 104 ntBASIC0.31□□□□□ -2.36
PGK1P00558 Y_RNA.233-201ENST00000364407 101 ntBASIC0.31□□□□□ -2.36
PGK1P00558 SNORA8.2-201ENST00000384372 139 ntBASIC0.31□□□□□ -2.36
PGK1P00558 Y_RNA.521-201ENST00000384560 114 ntBASIC0.31□□□□□ -2.36
PGK1P00558 RNU6-679P-201ENST00000391003 106 ntBASIC0.31□□□□□ -2.36
PGK1P00558 RPL39P25-201ENST00000449384 154 ntBASIC0.31□□□□□ -2.36
PGK1P00558 AC107027.2-201ENST00000512197 115 ntBASIC0.31□□□□□ -2.36
PGK1P00558 RNU6-765P-201ENST00000516916 99 ntBASIC0.31□□□□□ -2.36
PGK1P00558 RNU7-35P-201ENST00000517174 62 ntBASIC0.31□□□□□ -2.36
PGK1P00558 uc_338.16-201ENST00000621804 95 ntBASIC0.31□□□□□ -2.36
PGK1P00558 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
PGK1P00558 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
PGK1P00558 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
PGK1P00558 RNU6-1086P-201ENST00000410930 100 ntBASIC0.3□□□□□ -2.36
PGK1P00558 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
PGK1P00558 SNORA25.16-201ENST00000516741 121 ntBASIC0.3□□□□□ -2.36
PGK1P00558 AC067863.3-201ENST00000624172 122 ntBASIC0.3□□□□□ -2.36
PGK1P00558 MIR3658-201ENST00000636291 56 ntBASIC0.3□□□□□ -2.36
PGK1P00558 Y_RNA.497-201ENST00000384447 98 ntBASIC0.29□□□□□ -2.36
PGK1P00558 SNORA72.6-201ENST00000384520 129 ntBASIC0.29□□□□□ -2.36
PGK1P00558 RNU6-291P-201ENST00000384720 107 ntBASIC0.29□□□□□ -2.36
PGK1P00558 Y_RNA.567-201ENST00000384736 106 ntBASIC0.29□□□□□ -2.36
PGK1P00558 MIR644A-201ENST00000385262 94 ntBASIC0.29□□□□□ -2.36
PGK1P00558 SNORA75.5-201ENST00000391291 81 ntBASIC0.29□□□□□ -2.36
PGK1P00558 SNORA40.8-201ENST00000411034 126 ntBASIC0.29□□□□□ -2.36
PGK1P00558 MIR1270-201ENST00000459320 83 ntBASIC0.29□□□□□ -2.36
PGK1P00558 RNA5SP395-201ENST00000516567 118 ntBASIC0.29□□□□□ -2.36
PGK1P00558 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
PGK1P00558 MTND5P34-201ENST00000568888 325 ntBASIC0.29□□□□□ -2.36
PGK1P00558 SNORD115-2-201ENST00000362842 82 ntBASIC0.28□□□□□ -2.36
PGK1P00558 Y_RNA.120-201ENST00000363304 110 ntBASIC0.28□□□□□ -2.36
PGK1P00558 SNORD118-201ENST00000363593 134 ntBASIC0.28□□□□□ -2.36
PGK1P00558 RNU6-312P-201ENST00000364629 107 ntBASIC0.28□□□□□ -2.36
PGK1P00558 SNORD115-20-201ENST00000365099 82 ntBASIC0.28□□□□□ -2.36
PGK1P00558 RNA5SP117-201ENST00000365294 118 ntBASIC0.28□□□□□ -2.36
PGK1P00558 Y_RNA.515-201ENST00000384535 112 ntBASIC0.28□□□□□ -2.36
PGK1P00558 Y_RNA.793-201ENST00000411222 111 ntBASIC0.28□□□□□ -2.36
PGK1P00558 RNU2-35P-201ENST00000516446 142 ntBASIC0.28□□□□□ -2.36
PGK1P00558 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.28□□□□□ -2.36
PGK1P00558 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.28□□□□□ -2.36
PGK1P00558 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
PGK1P00558 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
PGK1P00558 RNU6-508P-201ENST00000363231 103 ntBASIC0.27□□□□□ -2.37
PGK1P00558 RNU6-818P-201ENST00000364837 108 ntBASIC0.27□□□□□ -2.37
PGK1P00558 Y_RNA.297-201ENST00000364950 91 ntBASIC0.27□□□□□ -2.37
PGK1P00558 Y_RNA.366-201ENST00000365540 102 ntBASIC0.27□□□□□ -2.37
PGK1P00558 AL512326.2-201ENST00000426359 151 ntBASIC0.27□□□□□ -2.37
PGK1P00558 RNU6-893P-201ENST00000458841 100 ntBASIC0.27□□□□□ -2.37
PGK1P00558 RNU7-113P-201ENST00000459273 62 ntBASIC0.27□□□□□ -2.37
PGK1P00558 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
PGK1P00558 RNU7-79P-201ENST00000516082 62 ntBASIC0.27□□□□□ -2.37
PGK1P00558 AL359881.1-201ENST00000602916 267 ntBASIC0.27□□□□□ -2.37
PGK1P00558 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.27□□□□□ -2.37
PGK1P00558 AC141273.2-201ENST00000618989 130 ntBASIC0.27□□□□□ -2.37
PGK1P00558 RNU4-84P-201ENST00000364200 139 ntBASIC0.26□□□□□ -2.37
PGK1P00558 RNU6-690P-201ENST00000365242 106 ntBASIC0.26□□□□□ -2.37
PGK1P00558 Y_RNA.337-201ENST00000365312 102 ntBASIC0.26□□□□□ -2.37
PGK1P00558 SNORA32-201ENST00000384072 121 ntBASIC0.26□□□□□ -2.37
PGK1P00558 Y_RNA.644-201ENST00000459006 113 ntBASIC0.26□□□□□ -2.37
PGK1P00558 Y_RNA.651-201ENST00000459380 103 ntBASIC0.26□□□□□ -2.37
PGK1P00558 RNU6-240P-201ENST00000516098 97 ntBASIC0.26□□□□□ -2.37
PGK1P00558 SNORA25.12-201ENST00000516202 82 ntBASIC0.26□□□□□ -2.37
PGK1P00558 Y_RNA.674-201ENST00000516362 113 ntBASIC0.26□□□□□ -2.37
PGK1P00558 RNU7-121P-201ENST00000516604 62 ntBASIC0.26□□□□□ -2.37
PGK1P00558 MIR548AE2-201ENST00000583456 67 ntBASIC0.26□□□□□ -2.37
PGK1P00558 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
PGK1P00558 AC078938.1-201ENST00000620993 318 ntBASIC0.26□□□□□ -2.37
PGK1P00558 RNU6-379P-201ENST00000363813 104 ntBASIC0.25□□□□□ -2.37
PGK1P00558 Y_RNA.489-201ENST00000384410 101 ntBASIC0.25□□□□□ -2.37
PGK1P00558 Y_RNA.536-201ENST00000384621 113 ntBASIC0.25□□□□□ -2.37
PGK1P00558 RNU6-239P-201ENST00000390990 99 ntBASIC0.25□□□□□ -2.37
PGK1P00558 RNU6-588P-201ENST00000410281 105 ntBASIC0.25□□□□□ -2.37
PGK1P00558 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
PGK1P00558 AL022718.1-201ENST00000412004 84 ntBASIC0.25□□□□□ -2.37
PGK1P00558 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
PGK1P00558 RNU7-137P-201ENST00000516788 62 ntBASIC0.25□□□□□ -2.37
PGK1P00558 MIR3646-201ENST00000578301 84 ntBASIC0.25□□□□□ -2.37
PGK1P00558 MIR4305-201ENST00000583252 102 ntBASIC0.25□□□□□ -2.37
PGK1P00558 AC072026.1-201ENST00000605023 201 ntBASIC0.25□□□□□ -2.37
PGK1P00558 MIR7107-201ENST00000611489 80 ntBASIC0.25□□□□□ -2.37
PGK1P00558 Y_RNA.357-201ENST00000365487 109 ntBASIC0.24□□□□□ -2.37
PGK1P00558 AL078595.1-201ENST00000404458 226 ntBASIC0.24□□□□□ -2.37
PGK1P00558 RNU6-863P-201ENST00000515989 104 ntBASIC0.24□□□□□ -2.37
PGK1P00558 SNORD67.1-201ENST00000516618 108 ntBASIC0.24□□□□□ -2.37
PGK1P00558 RNA5SP285-201ENST00000516619 119 ntBASIC0.24□□□□□ -2.37
PGK1P00558 RNA5SP33-201ENST00000516687 98 ntBASIC0.24□□□□□ -2.37
PGK1P00558 RNU6-531P-201ENST00000516694 104 ntBASIC0.24□□□□□ -2.37
PGK1P00558 AC022523.2-201ENST00000561045 150 ntBASIC0.24□□□□□ -2.37
PGK1P00558 AC011603.4-201ENST00000611325 277 ntBASIC0.24□□□□□ -2.37
PGK1P00558 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.24□□□□□ -2.37
PGK1P00558 U6.109-201ENST00000636749 87 ntBASIC0.24□□□□□ -2.37
PGK1P00558 RNA5SP133-201ENST00000363368 119 ntBASIC0.23□□□□□ -2.37
PGK1P00558 Y_RNA.174-201ENST00000363781 105 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms