Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 MIR892B-201ENST00000401279 77 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 RNU2-38P-201ENST00000410856 79 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.23□□□□□ -2.45
RAB3DO95716 MIR1270-201ENST00000459320 83 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 RNA5SP236-201ENST00000516169 116 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 RNU2-35P-201ENST00000516446 142 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 MIR4308-201ENST00000580634 81 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.23□□□□□ -2.45
RAB3DO95716 AC044792.1-201ENST00000593294 196 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
RAB3DO95716 RNU6-161P-201ENST00000363051 106 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 RNU6-269P-201ENST00000391077 97 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 RNA5SP163-201ENST00000410304 99 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 RNU7-159P-201ENST00000459284 62 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 MIR4298-201ENST00000584380 73 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 AL360085.1-201ENST00000604713 532 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.24□□□□□ -2.45
RAB3DO95716 RNU6-797P-201ENST00000363101 109 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 SNORD114-10-201ENST00000363409 72 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 RNA5SP403-201ENST00000363598 108 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 RNU6-690P-201ENST00000365242 106 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 MIR499A-201ENST00000384903 122 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 RNU7-165P-201ENST00000458864 60 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 MIR5706-201ENST00000579841 80 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 MIR4305-201ENST00000583252 102 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 MIR3925-201ENST00000584674 77 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 MIR548AD-201ENST00000584780 82 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 AC098479.1-201ENST00000609225 154 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 AC022709.1-201ENST00000615967 87 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 AC067863.3-201ENST00000624172 122 ntBASIC-0.25□□□□□ -2.45
RAB3DO95716 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.26□□□□□ -2.45
RAB3DO95716 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.26□□□□□ -2.45
RAB3DO95716 MTND1P19-201ENST00000511780 315 ntBASIC-0.26□□□□□ -2.45
RAB3DO95716 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.26□□□□□ -2.45
RAB3DO95716 MIR548H5-201ENST00000580314 60 ntBASIC-0.26□□□□□ -2.45
RAB3DO95716 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 RNU6-275P-201ENST00000364910 107 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 RNU6V-201ENST00000384105 107 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 RNU6-429P-201ENST00000384582 108 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 MIR548F4-201ENST00000408515 105 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 MTND2P23-201ENST00000422990 651 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 AC104692.1-201ENST00000472406 90 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 TRAJ51-201ENST00000504127 63 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 MIR4677-201ENST00000584153 80 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 uc_338.28-201ENST00000612082 187 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 U6.106-201ENST00000636360 105 ntBASIC-0.27□□□□□ -2.45
RAB3DO95716 SNORD27-201ENST00000363981 72 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 RNU6-768P-201ENST00000384683 107 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 SNORD41.1-201ENST00000391000 69 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 SNORD127-201ENST00000458892 86 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 RNU6-240P-201ENST00000516098 97 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 RNU2-60P-201ENST00000517290 128 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
RAB3DO95716 MIR4500-201ENST00000579472 76 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 MIR5190-201ENST00000581537 80 ntBASIC-0.28□□□□□ -2.45
RAB3DO95716 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.29□□□□□ -2.46
RAB3DO95716 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.29□□□□□ -2.46
RAB3DO95716 MIR106A-201ENST00000384870 81 ntBASIC-0.29□□□□□ -2.46
RAB3DO95716 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
RAB3DO95716 U7.6-201ENST00000610841 64 ntBASIC-0.29□□□□□ -2.46
RAB3DO95716 MIR635-201ENST00000384830 98 ntBASIC-0.3□□□□□ -2.46
RAB3DO95716 MIR599-201ENST00000385069 95 ntBASIC-0.3□□□□□ -2.46
RAB3DO95716 snoU13.18-201ENST00000459483 104 ntBASIC-0.3□□□□□ -2.46
RAB3DO95716 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 RNU6-449P-201ENST00000383914 107 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 RNA5SP63-201ENST00000391225 112 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 MIR548H3-201ENST00000408771 118 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 BX276092.1-201ENST00000427368 251 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 RNU6-180P-201ENST00000516697 61 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 NAMPTP3-201ENST00000569273 224 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 AC021443.1-201ENST00000604478 211 ntBASIC-0.31□□□□□ -2.46
RAB3DO95716 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 MIR206-201ENST00000384872 86 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 RNU4-69P-201ENST00000410677 143 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 HMGN2P22-201ENST00000427588 175 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 RNU7-164P-201ENST00000459221 62 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 AC138907.4-201ENST00000570107 226 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 AL670379.3-201ENST00000605040 251 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 RNU7-10P-201ENST00000607194 63 ntBASIC-0.32□□□□□ -2.46
RAB3DO95716 AC073869.9-201ENST00000641610 120 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms