Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 Y_RNA.558-201ENST00000384685 113 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 RNU6-1307P-201ENST00000391012 103 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 RNU7-2P-201ENST00000516096 62 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 MIR3192-201ENST00000584920 77 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 AL157834.3-201ENST00000615543 103 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 AL353770.2-201ENST00000620024 78 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 AL512310.12-203ENST00000640543 90 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 AC091304.10-201ENST00000641554 121 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 RNU6-1313P-201ENST00000362622 102 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 SNORD33-201ENST00000362761 85 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 RNU6-170P-201ENST00000362832 104 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 Y_RNA.220-201ENST00000364244 109 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 SNORD115-35-201ENST00000365122 82 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 Y_RNA.377-201ENST00000365644 108 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 RNU6-1086P-201ENST00000410930 100 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 RNU7-61P-201ENST00000515897 61 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 RNU6-1018P-201ENST00000516577 106 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 AL096861.1-201ENST00000610899 123 ntBASIC1.33□□□□□ -2.2
SMAD6O43541 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SMAD6O43541 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
SMAD6O43541 Y_RNA.290-201ENST00000364879 114 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 SNORD38B-201ENST00000384690 67 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 RNU6-1237P-201ENST00000384777 107 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 MIR206-201ENST00000384872 86 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 RNU6-644P-201ENST00000391155 98 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 Y_RNA.593-201ENST00000410292 98 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 AC004941.2-201ENST00000427009 228 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 UBL5P1-201ENST00000507979 193 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 Y_RNA.659-201ENST00000515994 113 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 RNU7-79P-201ENST00000516082 62 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 SNORD67.1-201ENST00000516618 108 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 MIR4777-201ENST00000583710 86 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SMAD6O43541 SNORD38B-202ENST00000625943 69 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 MIR1245B-201ENST00000636115 69 ntBASIC1.32□□□□□ -2.2
SMAD6O43541 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
SMAD6O43541 MIR494-201ENST00000349529 81 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 RNA5SP48-201ENST00000363969 126 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 Y_RNA.247-201ENST00000364500 92 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 snoU13.25-201ENST00000458945 104 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 RNU6-162P-201ENST00000516228 103 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 RN7SKP12-201ENST00000516275 143 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 PRELID3BP2-201ENST00000605362 201 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 AC105081.1-201ENST00000617727 106 ntBASIC1.31□□□□□ -2.2
SMAD6O43541 Y_RNA.4-201ENST00000362333 112 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 Y_RNA.95-201ENST00000363079 95 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 SNORA25.3-201ENST00000363205 127 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 Y_RNA.164-201ENST00000363709 102 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 SNORD45B-201ENST00000364617 72 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 Y_RNA.448-201ENST00000384185 108 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 RNU6-1275P-201ENST00000391087 107 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 MIR1302-7-201ENST00000408841 72 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 AC096949.1-201ENST00000412047 152 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 AC244023.1-201ENST00000426884 112 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
SMAD6O43541 AC079140.2-201ENST00000506193 142 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 RNU7-137P-201ENST00000516788 62 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 AC026421.1-201ENST00000519101 163 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
SMAD6O43541 AC242498.1-201ENST00000604134 111 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 MIR376B-201ENST00000614515 100 ntBASIC1.3□□□□□ -2.2
SMAD6O43541 Y_RNA.467-201ENST00000384297 102 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 MIR34C-201ENST00000384831 77 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 RNU6-1321P-201ENST00000390905 107 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 RPL30P7-201ENST00000479312 323 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 RNU6-1006P-201ENST00000516998 103 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 AL357312.1-201ENST00000603879 298 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 U7.3-201ENST00000616123 62 ntBASIC1.29□□□□□ -2.2
SMAD6O43541 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.29□□□□□ -2.2
SMAD6O43541 Y_RNA.17-201ENST00000362433 111 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 SNORD114-10-201ENST00000363409 72 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 RNY1P13-201ENST00000365030 105 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 RNA5SP237-201ENST00000410414 113 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 MRPL35P3-201ENST00000421557 364 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 RPS27P16-201ENST00000425758 201 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 AC141846.1-201ENST00000568348 142 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 AC096720.1-201ENST00000604441 183 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.28□□□□□ -2.2
SMAD6O43541 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
SMAD6O43541 MIR302D-201ENST00000362275 68 ntBASIC1.27□□□□□ -2.21
SMAD6O43541 Y_RNA.73-201ENST00000362910 113 ntBASIC1.27□□□□□ -2.21
SMAD6O43541 Y_RNA.190-201ENST00000363964 101 ntBASIC1.27□□□□□ -2.21
SMAD6O43541 RNU6-865P-201ENST00000364772 107 ntBASIC1.27□□□□□ -2.21
SMAD6O43541 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms