Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
PROM1O43490 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
PROM1O43490 RNU6-521P-201ENST00000516663 105 ntBASIC1.42□□□□□ -2.18
PROM1O43490 RNA5SP480-201ENST00000516840 109 ntBASIC1.42□□□□□ -2.18
PROM1O43490 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
PROM1O43490 Y_RNA.328-201ENST00000365208 113 ntBASIC1.41□□□□□ -2.18
PROM1O43490 MIR605-201ENST00000385078 83 ntBASIC1.41□□□□□ -2.18
PROM1O43490 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
PROM1O43490 RNA5SP89-201ENST00000410300 108 ntBASIC1.41□□□□□ -2.18
PROM1O43490 SNORA19.1-201ENST00000410656 129 ntBASIC1.41□□□□□ -2.18
PROM1O43490 SNORD67.1-201ENST00000516618 108 ntBASIC1.41□□□□□ -2.18
PROM1O43490 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
PROM1O43490 RNU6-537P-201ENST00000517277 103 ntBASIC1.41□□□□□ -2.18
PROM1O43490 MIR4264-201ENST00000583520 66 ntBASIC1.41□□□□□ -2.18
PROM1O43490 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
PROM1O43490 MIR6516-201ENST00000630554 81 ntBASIC1.41□□□□□ -2.18
PROM1O43490 SNORA7.1-201ENST00000363750 139 ntBASIC1.4□□□□□ -2.19
PROM1O43490 RNU6-654P-201ENST00000364373 107 ntBASIC1.4□□□□□ -2.19
PROM1O43490 Y_RNA.360-201ENST00000365512 102 ntBASIC1.4□□□□□ -2.19
PROM1O43490 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
PROM1O43490 RNA5SP95-201ENST00000410319 137 ntBASIC1.4□□□□□ -2.19
PROM1O43490 RNU7-62P-201ENST00000458856 62 ntBASIC1.4□□□□□ -2.19
PROM1O43490 snoU13.2-201ENST00000459201 104 ntBASIC1.4□□□□□ -2.19
PROM1O43490 AC048334.1-201ENST00000477975 159 ntBASIC1.4□□□□□ -2.19
PROM1O43490 RNU7-2P-201ENST00000516096 62 ntBASIC1.4□□□□□ -2.19
PROM1O43490 AC141846.1-201ENST00000568348 142 ntBASIC1.4□□□□□ -2.19
PROM1O43490 AL662814.1-201ENST00000617364 121 ntBASIC1.4□□□□□ -2.19
PROM1O43490 AC105081.1-201ENST00000617727 106 ntBASIC1.4□□□□□ -2.19
PROM1O43490 MIR6734-201ENST00000621166 68 ntBASIC1.4□□□□□ -2.19
PROM1O43490 AL512310.12-203ENST00000640543 90 ntBASIC1.4□□□□□ -2.19
PROM1O43490 Y_RNA.191-201ENST00000363972 113 ntBASIC1.39□□□□□ -2.19
PROM1O43490 RNU4-36P-201ENST00000364294 144 ntBASIC1.39□□□□□ -2.19
PROM1O43490 Y_RNA.330-201ENST00000365230 109 ntBASIC1.39□□□□□ -2.19
PROM1O43490 MIR206-201ENST00000384872 86 ntBASIC1.39□□□□□ -2.19
PROM1O43490 MIR590-201ENST00000385008 97 ntBASIC1.39□□□□□ -2.19
PROM1O43490 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.39□□□□□ -2.19
PROM1O43490 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.39□□□□□ -2.19
PROM1O43490 SNORA31.2-201ENST00000516019 134 ntBASIC1.39□□□□□ -2.19
PROM1O43490 RNU11-2P-201ENST00000516898 142 ntBASIC1.39□□□□□ -2.19
PROM1O43490 DEFB131E-201ENST00000532329 154 ntBASIC1.39□□□□□ -2.19
PROM1O43490 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PROM1O43490 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
PROM1O43490 RNY1P13-201ENST00000365030 105 ntBASIC1.38□□□□□ -2.19
PROM1O43490 SNORD115-35-201ENST00000365122 82 ntBASIC1.38□□□□□ -2.19
PROM1O43490 Y_RNA.448-201ENST00000384185 108 ntBASIC1.38□□□□□ -2.19
PROM1O43490 MT-TN-201ENST00000387400 73 ntBASIC1.38□□□□□ -2.19
PROM1O43490 RNU6-679P-201ENST00000391003 106 ntBASIC1.38□□□□□ -2.19
PROM1O43490 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
PROM1O43490 Y_RNA.677-201ENST00000516401 85 ntBASIC1.38□□□□□ -2.19
PROM1O43490 AP003716.2-201ENST00000528260 108 ntBASIC1.38□□□□□ -2.19
PROM1O43490 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.38□□□□□ -2.19
PROM1O43490 MIR4452-201ENST00000583004 71 ntBASIC1.38□□□□□ -2.19
PROM1O43490 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
PROM1O43490 MIR6740-201ENST00000618268 113 ntBASIC1.38□□□□□ -2.19
PROM1O43490 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
PROM1O43490 RNU6-865P-201ENST00000364772 107 ntBASIC1.37□□□□□ -2.19
PROM1O43490 SNORA2B-201ENST00000384583 137 ntBASIC1.37□□□□□ -2.19
PROM1O43490 RNU6-1165P-201ENST00000410119 107 ntBASIC1.37□□□□□ -2.19
PROM1O43490 RNU6-109P-201ENST00000516364 107 ntBASIC1.37□□□□□ -2.19
PROM1O43490 RNU6-184P-201ENST00000516514 107 ntBASIC1.37□□□□□ -2.19
PROM1O43490 RNU7-137P-201ENST00000516788 62 ntBASIC1.37□□□□□ -2.19
PROM1O43490 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.37□□□□□ -2.19
PROM1O43490 MIR4694-201ENST00000578534 80 ntBASIC1.37□□□□□ -2.19
PROM1O43490 RNY3P2-201ENST00000362918 102 ntBASIC1.36□□□□□ -2.19
PROM1O43490 SNORD114-10-201ENST00000363409 72 ntBASIC1.36□□□□□ -2.19
PROM1O43490 Y_RNA.544-201ENST00000384650 113 ntBASIC1.36□□□□□ -2.19
PROM1O43490 MIR577-201ENST00000385196 96 ntBASIC1.36□□□□□ -2.19
PROM1O43490 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.36□□□□□ -2.19
PROM1O43490 RNU6-613P-201ENST00000410412 108 ntBASIC1.36□□□□□ -2.19
PROM1O43490 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
PROM1O43490 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
PROM1O43490 AC133485.1-201ENST00000567176 124 ntBASIC1.36□□□□□ -2.19
PROM1O43490 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
PROM1O43490 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
PROM1O43490 Y_RNA.78-201ENST00000362970 110 ntBASIC1.35□□□□□ -2.19
PROM1O43490 RNU6-832P-201ENST00000363319 107 ntBASIC1.35□□□□□ -2.19
PROM1O43490 RNU6-1099P-201ENST00000363533 107 ntBASIC1.35□□□□□ -2.19
PROM1O43490 RNU6-949P-201ENST00000384040 107 ntBASIC1.35□□□□□ -2.19
PROM1O43490 RNU6-1321P-201ENST00000390905 107 ntBASIC1.35□□□□□ -2.19
PROM1O43490 AL353813.1-201ENST00000440700 253 ntBASIC1.35□□□□□ -2.19
PROM1O43490 RNU6-904P-201ENST00000516206 101 ntBASIC1.35□□□□□ -2.19
PROM1O43490 RNA5SP102-201ENST00000516865 106 ntBASIC1.35□□□□□ -2.19
PROM1O43490 MIR4421-201ENST00000578133 69 ntBASIC1.35□□□□□ -2.19
PROM1O43490 AL157834.3-201ENST00000615543 103 ntBASIC1.35□□□□□ -2.19
PROM1O43490 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
PROM1O43490 Y_RNA.10-201ENST00000362371 110 ntBASIC1.34□□□□□ -2.19
PROM1O43490 RNU6-1307P-201ENST00000391012 103 ntBASIC1.34□□□□□ -2.19
PROM1O43490 RNU6-1054P-201ENST00000411293 104 ntBASIC1.34□□□□□ -2.19
PROM1O43490 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
PROM1O43490 Y_RNA.659-201ENST00000515994 113 ntBASIC1.34□□□□□ -2.19
PROM1O43490 RNU6-1018P-201ENST00000516577 106 ntBASIC1.34□□□□□ -2.19
PROM1O43490 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.34□□□□□ -2.19
PROM1O43490 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
PROM1O43490 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
PROM1O43490 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PROM1O43490 MIR377-201ENST00000362145 69 ntBASIC1.33□□□□□ -2.2
PROM1O43490 RNU6-1313P-201ENST00000362622 102 ntBASIC1.33□□□□□ -2.2
PROM1O43490 SNORD114-26-201ENST00000363543 72 ntBASIC1.33□□□□□ -2.2
PROM1O43490 RNU6-1201P-201ENST00000384227 107 ntBASIC1.33□□□□□ -2.2
PROM1O43490 MIR563-201ENST00000385080 79 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 942.8 ms