Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BX276092.1-201ENST00000427368 251 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 HMGN2P22-201ENST00000427588 175 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 RNU6-561P-201ENST00000516222 102 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 AC105081.1-201ENST00000617727 106 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 SNORD114-10-201ENST00000363409 72 ntBASIC-0.59□□□□□ -2.5
UPK1AO00322 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.59□□□□□ -2.5
UPK1AO00322 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.59□□□□□ -2.5
UPK1AO00322 MIR599-201ENST00000385069 95 ntBASIC-0.59□□□□□ -2.5
UPK1AO00322 RNU6-284P-201ENST00000411105 106 ntBASIC-0.59□□□□□ -2.5
UPK1AO00322 SCARNA15-202ENST00000516881 127 ntBASIC-0.59□□□□□ -2.5
UPK1AO00322 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.59□□□□□ -2.5
UPK1AO00322 MIR6759-201ENST00000638110 65 ntBASIC-0.59□□□□□ -2.5
UPK1AO00322 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.6□□□□□ -2.51
UPK1AO00322 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.6□□□□□ -2.51
UPK1AO00322 RNU6-806P-201ENST00000365147 105 ntBASIC-0.6□□□□□ -2.51
UPK1AO00322 RNA5SP484-201ENST00000458857 111 ntBASIC-0.6□□□□□ -2.51
UPK1AO00322 SNORA25.13-201ENST00000516395 103 ntBASIC-0.6□□□□□ -2.51
UPK1AO00322 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
UPK1AO00322 AC006504.6-201ENST00000590142 199 ntBASIC-0.6□□□□□ -2.51
UPK1AO00322 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 RNU4-17P-201ENST00000365598 141 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 RNU6-449P-201ENST00000383914 107 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 MIR624-201ENST00000385217 97 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 RNU6-381P-201ENST00000391259 108 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 RNU4-43P-201ENST00000410628 137 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.61□□□□□ -2.51
UPK1AO00322 AL121914.1-201ENST00000450188 156 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 AC097635.1-201ENST00000450678 155 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 RNU7-74P-201ENST00000459104 62 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 MIR4795-201ENST00000584182 89 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.61□□□□□ -2.51
UPK1AO00322 SNORD115-2-201ENST00000362842 82 ntBASIC-0.62□□□□□ -2.51
UPK1AO00322 SNORD115-20-201ENST00000365099 82 ntBASIC-0.62□□□□□ -2.51
UPK1AO00322 RNU6-480P-201ENST00000384332 107 ntBASIC-0.62□□□□□ -2.51
UPK1AO00322 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.62□□□□□ -2.51
UPK1AO00322 AC114755.3-201ENST00000481111 251 ntBASIC-0.62□□□□□ -2.51
UPK1AO00322 MTND3P22-201ENST00000510932 243 ntBASIC-0.62□□□□□ -2.51
UPK1AO00322 RNU6-988P-201ENST00000519081 107 ntBASIC-0.62□□□□□ -2.51
UPK1AO00322 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.62□□□□□ -2.51
UPK1AO00322 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.62□□□□□ -2.51
UPK1AO00322 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 RNU6-103P-201ENST00000363686 107 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.63□□□□□ -2.51
UPK1AO00322 MTND5P22-201ENST00000458380 195 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 SNORD2.1-201ENST00000458762 69 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 TRAJ51-201ENST00000504127 63 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 RNA5SP285-201ENST00000516619 119 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 MIR548AE2-201ENST00000583456 67 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 AL359881.1-201ENST00000602916 267 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 RN7SL660P-201ENST00000614852 299 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 AL365265.1-201ENST00000621045 234 ntBASIC-0.63□□□□□ -2.51
UPK1AO00322 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 RNU6-978P-201ENST00000364371 103 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 RNU7-13P-201ENST00000516413 62 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 MIR4500-201ENST00000579472 76 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.64□□□□□ -2.51
UPK1AO00322 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 RNA5SP98-201ENST00000363158 137 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 SNORD114-11-201ENST00000363738 75 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 SNORD42.2-201ENST00000365570 69 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 RNU6-811P-201ENST00000384069 107 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 AC244250.2-201ENST00000418731 148 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 AC096720.1-201ENST00000604441 183 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 AL391099.1-201ENST00000624635 187 ntBASIC-0.65□□□□□ -2.51
UPK1AO00322 RNU4-84P-201ENST00000364200 139 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 RNU6-865P-201ENST00000364772 107 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 U8.6-201ENST00000364939 135 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 RNA5SP451-201ENST00000410588 110 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 RNU6-651P-201ENST00000411040 105 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 MTND5P20-201ENST00000448677 143 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 AL442663.2-201ENST00000554385 511 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 MIR4436A-201ENST00000585278 85 ntBASIC-0.66□□□□□ -2.52
UPK1AO00322 SNORA25.7-201ENST00000364375 127 ntBASIC-0.67□□□□□ -2.52
UPK1AO00322 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.67□□□□□ -2.52
UPK1AO00322 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.67□□□□□ -2.52
UPK1AO00322 MT-TD-201ENST00000387419 68 ntBASIC-0.67□□□□□ -2.52
UPK1AO00322 MIR3681-201ENST00000580089 72 ntBASIC-0.67□□□□□ -2.52
UPK1AO00322 MIR4473-201ENST00000583731 91 ntBASIC-0.67□□□□□ -2.52
UPK1AO00322 AP001180.6-201ENST00000584918 159 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms