Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
AP3B1O00203 MIR548H5-201ENST00000580314 60 ntBASIC-0.51□□□□□ -2.49
AP3B1O00203 AC098479.1-201ENST00000609225 154 ntBASIC-0.51□□□□□ -2.49
AP3B1O00203 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.51□□□□□ -2.49
AP3B1O00203 RNU4-17P-201ENST00000365598 141 ntBASIC-0.52□□□□□ -2.49
AP3B1O00203 MIR599-201ENST00000385069 95 ntBASIC-0.52□□□□□ -2.49
AP3B1O00203 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.52□□□□□ -2.49
AP3B1O00203 RNU4-43P-201ENST00000410628 137 ntBASIC-0.52□□□□□ -2.49
AP3B1O00203 AL022718.1-201ENST00000412004 84 ntBASIC-0.52□□□□□ -2.49
AP3B1O00203 AC113618.1-201ENST00000416747 285 ntBASIC-0.52□□□□□ -2.49
AP3B1O00203 MTND4P29-201ENST00000503122 1372 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 MIR516B1-201ENST00000385211 90 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 MIR876-201ENST00000401147 81 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 RNU6-988P-201ENST00000519081 107 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.53□□□□□ -2.49
AP3B1O00203 RNU6-865P-201ENST00000364772 107 ntBASIC-0.54□□□□□ -2.5
AP3B1O00203 SNORD14C-201ENST00000365382 88 ntBASIC-0.54□□□□□ -2.5
AP3B1O00203 MIR329-2-201ENST00000385029 84 ntBASIC-0.54□□□□□ -2.5
AP3B1O00203 MIR624-201ENST00000385217 97 ntBASIC-0.54□□□□□ -2.5
AP3B1O00203 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.54□□□□□ -2.5
AP3B1O00203 MIR3666-201ENST00000607845 111 ntBASIC-0.54□□□□□ -2.5
AP3B1O00203 U2.14-201ENST00000615943 113 ntBASIC-0.54□□□□□ -2.5
AP3B1O00203 MIR148A-201ENST00000362215 68 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 SNORD115-2-201ENST00000362842 82 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 SNORD114-10-201ENST00000363409 72 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 SNORD115-20-201ENST00000365099 82 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 RNU6-449P-201ENST00000383914 107 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 RNU6-429P-201ENST00000384582 108 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 MIR635-201ENST00000384830 98 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 RNA5SP300-201ENST00000391197 107 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 MIR1270-201ENST00000459320 83 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 SNORD126-201ENST00000459475 77 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 MIR4500-201ENST00000579472 76 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 MIR548S-201ENST00000581352 82 ntBASIC-0.55□□□□□ -2.5
AP3B1O00203 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.56□□□□□ -2.5
AP3B1O00203 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.56□□□□□ -2.5
AP3B1O00203 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.56□□□□□ -2.5
AP3B1O00203 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.56□□□□□ -2.5
AP3B1O00203 AC244250.2-201ENST00000418731 148 ntBASIC-0.56□□□□□ -2.5
AP3B1O00203 SNORA25.13-201ENST00000516395 103 ntBASIC-0.56□□□□□ -2.5
AP3B1O00203 MIR4680-201ENST00000580906 66 ntBASIC-0.56□□□□□ -2.5
AP3B1O00203 RNU6-509P-201ENST00000363519 107 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 RNU2-35P-201ENST00000516446 142 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 IGLVI-20-201ENST00000519296 130 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 MIR4473-201ENST00000583731 91 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 RNU7-10P-201ENST00000607194 63 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 MIR8064-201ENST00000612863 90 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 RN7SL660P-201ENST00000614852 299 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 AL162726.3-218ENST00000636401 95 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 MIR4788-201ENST00000639104 80 ntBASIC-0.57□□□□□ -2.5
AP3B1O00203 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
AP3B1O00203 SNORD114-31-201ENST00000363219 75 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 RNU6-103P-201ENST00000363686 107 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 SNORA32.3-201ENST00000384772 121 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 MT-TD-201ENST00000387419 68 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 AC109327.2-201ENST00000448339 378 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 AC097635.1-201ENST00000450678 155 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 MIR4744-201ENST00000581563 82 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.58□□□□□ -2.5
AP3B1O00203 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
AP3B1O00203 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.58□□□□□ -2.5
AP3B1O00203 RNA5SP257-201ENST00000363023 116 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 SNORD114-28-201ENST00000363610 72 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 U8.6-201ENST00000364939 135 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 RNU6-690P-201ENST00000365242 106 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 RNY3P14-201ENST00000384309 102 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 MIR196A2-201ENST00000385189 110 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 RNY3P16-201ENST00000516338 101 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 MIR3920-201ENST00000581751 86 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 MIR4282-201ENST00000583613 67 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 MIR6507-201ENST00000613630 70 ntBASIC-0.59□□□□□ -2.5
AP3B1O00203 MIR655-201ENST00000362159 97 ntBASIC-0.6□□□□□ -2.51
AP3B1O00203 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.6□□□□□ -2.51
AP3B1O00203 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.6□□□□□ -2.51
AP3B1O00203 RNU6-923P-201ENST00000364753 107 ntBASIC-0.6□□□□□ -2.51
AP3B1O00203 RNU6-811P-201ENST00000384069 107 ntBASIC-0.6□□□□□ -2.51
AP3B1O00203 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.6□□□□□ -2.51
AP3B1O00203 RNU7-195P-201ENST00000458793 62 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms