Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MIR1197-201ENST00000408818 88 ntBASIC-0.49□□□□□ -2.49
SMKR1H3BMG3 AC006210.1-201ENST00000424882 111 ntBASIC-0.49□□□□□ -2.49
SMKR1H3BMG3 AC084368.1-201ENST00000620935 65 ntBASIC-0.49□□□□□ -2.49
SMKR1H3BMG3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR876-201ENST00000401147 81 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR548P-201ENST00000408336 84 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 RN7SL793P-201ENST00000583259 296 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR548AE2-201ENST00000583456 67 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR3666-201ENST00000607845 111 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 AC105081.1-201ENST00000617727 106 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 MIR599-201ENST00000385069 95 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 RNU6-578P-201ENST00000390980 103 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 MIR193B-201ENST00000384907 83 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 AC109327.2-201ENST00000448339 378 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 AC097635.1-201ENST00000450678 155 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 snoU13.18-201ENST00000459483 104 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 SNORD49B-201ENST00000365172 72 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 BX276092.1-201ENST00000427368 251 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 TRAJ51-201ENST00000504127 63 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNU6-643P-201ENST00000384018 107 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNU6-713P-201ENST00000384761 107 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNU6-985P-201ENST00000410182 104 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 MIR4500-201ENST00000579472 76 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 MIR8087-201ENST00000612745 78 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 MIR3171-201ENST00000584270 74 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU6-865P-201ENST00000364772 107 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU6-690P-201ENST00000365242 106 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU7-74P-201ENST00000459104 62 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU2-35P-201ENST00000516446 142 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 MIR2909-201ENST00000617113 69 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 AL162726.3-218ENST00000636401 95 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 MIR516B1-201ENST00000385211 90 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 MIR548I2-201ENST00000408348 149 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 RNA5SP236-201ENST00000516169 116 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 MIR4263-201ENST00000584745 83 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 AC011603.4-201ENST00000611325 277 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 U6.104-201ENST00000637979 90 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 RNY1-201ENST00000364228 113 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR519A1-201ENST00000385257 85 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR1287-201ENST00000408492 90 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 RNU7-48P-201ENST00000458875 63 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 AC020661.2-201ENST00000560114 134 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR4643-201ENST00000577473 78 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR1273G-201ENST00000577677 100 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR3920-201ENST00000581751 86 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 RNU2-4P-201ENST00000606190 192 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 SNORD14C-201ENST00000365382 88 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 MIR1302-6-201ENST00000408466 90 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 MIR1270-201ENST00000459320 83 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 RNU7-13P-201ENST00000516413 62 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 RNU4-69P-201ENST00000410677 143 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 RNY3P16-201ENST00000516338 101 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 MIR206-201ENST00000384872 86 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 MIR4788-201ENST00000639104 80 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 294.3 ms