Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RNU7-164P-201ENST00000459221 62 ntBASIC0.69□□□□□ -2.3
TRIM49BA6NDI0 AC133485.4-201ENST00000561835 220 ntBASIC0.69□□□□□ -2.3
TRIM49BA6NDI0 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
TRIM49BA6NDI0 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
TRIM49BA6NDI0 AC138907.4-201ENST00000570107 226 ntBASIC0.69□□□□□ -2.3
TRIM49BA6NDI0 MIR3121-201ENST00000579680 77 ntBASIC0.69□□□□□ -2.3
TRIM49BA6NDI0 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
TRIM49BA6NDI0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.68□□□□□ -2.3
TRIM49BA6NDI0 RNY1P13-201ENST00000365030 105 ntBASIC0.68□□□□□ -2.3
TRIM49BA6NDI0 MIR520F-201ENST00000384824 87 ntBASIC0.68□□□□□ -2.3
TRIM49BA6NDI0 RPS26P5-201ENST00000418544 335 ntBASIC0.68□□□□□ -2.3
TRIM49BA6NDI0 RNU7-185P-201ENST00000459215 60 ntBASIC0.68□□□□□ -2.3
TRIM49BA6NDI0 RNU7-113P-201ENST00000459273 62 ntBASIC0.68□□□□□ -2.3
TRIM49BA6NDI0 Y_RNA.298-201ENST00000364960 107 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 Y_RNA.568-201ENST00000384742 113 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 MIR520H-201ENST00000385126 88 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 Y_RNA.630-201ENST00000411370 108 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 RNA5SP33-201ENST00000516687 98 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 RNU6-971P-201ENST00000516920 106 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 AP001328.1-201ENST00000528550 176 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 AC105081.1-201ENST00000617727 106 ntBASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
TRIM49BA6NDI0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRIM49BA6NDI0 RNA5SP237-201ENST00000410414 113 ntBASIC0.66□□□□□ -2.3
TRIM49BA6NDI0 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
TRIM49BA6NDI0 RNU7-107P-201ENST00000459121 61 ntBASIC0.66□□□□□ -2.3
TRIM49BA6NDI0 U7.7-201ENST00000459276 60 ntBASIC0.66□□□□□ -2.3
TRIM49BA6NDI0 RNU6-1234P-201ENST00000516877 103 ntBASIC0.66□□□□□ -2.3
TRIM49BA6NDI0 AL137067.1-201ENST00000615933 120 ntBASIC0.66□□□□□ -2.3
TRIM49BA6NDI0 SNORD18B-201ENST00000365659 72 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 RNU6-1062P-201ENST00000383908 107 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.531-201ENST00000384589 121 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 RNU6-1086P-201ENST00000410930 100 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 AL022718.1-201ENST00000412004 84 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 AC244098.3-201ENST00000424803 96 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 SUMO1P3-201ENST00000439961 304 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 RNU7-102P-201ENST00000458948 62 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 RNU6-977P-201ENST00000516411 103 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 SNORD67.1-201ENST00000516618 108 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 SNORA25.16-201ENST00000516741 121 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 AC011195.1-201ENST00000578177 177 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 MIR8066-201ENST00000617280 78 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 MIR6779-201ENST00000617283 64 ntBASIC0.65□□□□□ -2.31
TRIM49BA6NDI0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 MIR1-1-201ENST00000362147 71 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.218-201ENST00000364218 104 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 MIR1263-201ENST00000408324 86 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 MIR1257-201ENST00000408490 117 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 RN7SKP19-201ENST00000516016 252 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 RNU7-79P-201ENST00000516082 62 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 RNU7-35P-201ENST00000517174 62 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 MIR3152-201ENST00000579801 74 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 MIR6513-201ENST00000621188 64 ntBASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.64□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 RNU6-403P-201ENST00000363163 104 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 MIR125B2-201ENST00000385128 89 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.586-201ENST00000391146 98 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 SNORD93-201ENST00000408813 74 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 MTATP6P21-201ENST00000440681 189 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 RNU6-1211P-201ENST00000459179 105 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.773-201ENST00000607168 90 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 AC011603.4-201ENST00000611325 277 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 AP001340.1-201ENST00000624405 217 ntBASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
TRIM49BA6NDI0 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNY1P5-201ENST00000383890 115 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNU6-949P-201ENST00000384040 107 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNU6-616P-201ENST00000384353 107 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 SNORA72.6-201ENST00000384520 129 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNA5SP261-201ENST00000410536 106 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNU4-83P-201ENST00000410863 133 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 AL158147.1-201ENST00000443970 75 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.692-201ENST00000516627 105 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNU7-137P-201ENST00000516788 62 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RNU7-156P-201ENST00000517214 74 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 MTND5P34-201ENST00000568888 325 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 MIR4491-201ENST00000581087 68 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 RN7SL793P-201ENST00000583259 296 ntBASIC0.62□□□□□ -2.31
TRIM49BA6NDI0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.61□□□□□ -2.31
TRIM49BA6NDI0 SNORD115-2-201ENST00000362842 82 ntBASIC0.61□□□□□ -2.31
TRIM49BA6NDI0 SNORD115-20-201ENST00000365099 82 ntBASIC0.61□□□□□ -2.31
TRIM49BA6NDI0 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
TRIM49BA6NDI0 MT-TF-201ENST00000387314 71 ntBASIC0.61□□□□□ -2.31
TRIM49BA6NDI0 MIR18B-201ENST00000454574 71 ntBASIC0.61□□□□□ -2.31
TRIM49BA6NDI0 RNU6-772P-201ENST00000516042 105 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 280.3 ms