Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
TRAV40A0A0B4J280 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
TRAV40A0A0B4J280 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV40A0A0B4J280 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.120-201ENST00000363304 110 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-1020P-201ENST00000363684 107 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-379P-201ENST00000363813 104 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNA5SP117-201ENST00000365294 118 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.366-201ENST00000365540 102 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-291P-201ENST00000384720 107 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.567-201ENST00000384736 106 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNA5SP261-201ENST00000410536 106 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.651-201ENST00000459380 103 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 SNORA25.12-201ENST00000516202 82 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.686-201ENST00000516548 134 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-531P-201ENST00000516694 104 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-388P-201ENST00000517012 105 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-389P-201ENST00000517048 105 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 RNA5SP330-201ENST00000517096 96 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 MIR548AE2-201ENST00000583456 67 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 AC105081.1-201ENST00000617727 106 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
TRAV40A0A0B4J280 SNORA63.5-201ENST00000363548 123 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-309P-201ENST00000364573 106 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.258-201ENST00000364613 105 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.297-201ENST00000364950 91 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.435-201ENST00000384095 112 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 SNORA8.2-201ENST00000384372 139 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 AL078595.1-201ENST00000404458 226 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 RPL39P25-201ENST00000449384 154 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 RNU7-113P-201ENST00000459273 62 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 SNORA62.5-201ENST00000516634 120 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 RNU7-35P-201ENST00000517174 62 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.23□□□□□ -2.37
TRAV40A0A0B4J280 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-1307P-201ENST00000391012 103 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 SNORA40.8-201ENST00000411034 126 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 SUMO1P3-201ENST00000439961 304 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.644-201ENST00000459006 113 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.674-201ENST00000516362 113 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 SNORD67.1-201ENST00000516618 108 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 RNA5SP33-201ENST00000516687 98 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 RNU6-861P-201ENST00000516745 106 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 AC108081.1-201ENST00000604358 221 ntBASIC0.22□□□□□ -2.37
TRAV40A0A0B4J280 Y_RNA.115-201ENST00000363272 98 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-682P-201ENST00000363843 106 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-690P-201ENST00000365242 106 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-187P-201ENST00000384139 106 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-1104P-201ENST00000384723 104 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 AC108059.2-201ENST00000434626 151 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 AC069271.1-201ENST00000445577 156 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-863P-201ENST00000515989 104 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-1271P-201ENST00000517049 105 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 MIR4305-201ENST00000583252 102 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 Z83818.1-201ENST00000603584 150 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 U6.109-201ENST00000636749 87 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 MIR6844-201ENST00000637122 62 ntBASIC0.21□□□□□ -2.38
TRAV40A0A0B4J280 RNA5SP133-201ENST00000363368 119 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 RNU4-84P-201ENST00000364200 139 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-312P-201ENST00000364629 107 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.536-201ENST00000384621 113 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-535P-201ENST00000384722 107 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 AC107027.2-201ENST00000512197 115 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 RNU7-123P-201ENST00000515911 60 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-138P-201ENST00000515952 107 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 RNU7-137P-201ENST00000516788 62 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 AC138749.4-201ENST00000563970 127 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 MIR7107-201ENST00000611489 80 ntBASIC0.2□□□□□ -2.38
TRAV40A0A0B4J280 SNORD115-2-201ENST00000362842 82 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.188-201ENST00000363952 111 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.251-201ENST00000364551 99 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 SNORD115-20-201ENST00000365099 82 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.337-201ENST00000365312 102 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.531-201ENST00000384589 121 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-239P-201ENST00000390990 99 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 SNORA75.5-201ENST00000391291 81 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 MIR1197-201ENST00000408818 88 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 RNU7-121P-201ENST00000516604 62 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 Y_RNA.697-201ENST00000516776 113 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 MIR4752-201ENST00000579672 72 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 MIR6755-201ENST00000619993 66 ntBASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV40A0A0B4J280 RNY1P2-201ENST00000364820 117 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 RNU6-1130P-201ENST00000365434 107 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 RNU4-45P-201ENST00000365469 141 ntBASIC0.18□□□□□ -2.38
TRAV40A0A0B4J280 MT-TI-201ENST00000387365 69 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms