Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
NR2E3Q9Y5X4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
NR2E3Q9Y5X4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.57□□□□□ -2.16
NR2E3Q9Y5X4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.57□□□□□ -2.16
NR2E3Q9Y5X4 AP003716.2-201ENST00000528260 108 ntBASIC1.57□□□□□ -2.16
NR2E3Q9Y5X4 MTND5P34-201ENST00000568888 325 ntBASIC1.57□□□□□ -2.16
NR2E3Q9Y5X4 Z97988.1-201ENST00000637697 135 ntBASIC1.57□□□□□ -2.16
NR2E3Q9Y5X4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 Y_RNA.35-201ENST00000362601 101 ntBASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 SNORD114-27-201ENST00000363766 70 ntBASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 MIR548A1-201ENST00000385041 97 ntBASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 MIR1270-201ENST00000459320 83 ntBASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 AC004812.1-201ENST00000540773 146 ntBASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 MIR8065-201ENST00000620577 100 ntBASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NR2E3Q9Y5X4 SNORD115-2-201ENST00000362842 82 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 SNORD115-20-201ENST00000365099 82 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 RNY1P4-201ENST00000384595 115 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 MIR548A3-201ENST00000385297 97 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 RNU6-919P-201ENST00000516731 104 ntBASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.55□□□□□ -2.16
NR2E3Q9Y5X4 SNORA22.1-201ENST00000362701 134 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 Y_RNA.81-201ENST00000362997 102 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 RNU6-44P-201ENST00000384045 107 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 RNU6-602P-201ENST00000411155 105 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 AL035461.1-201ENST00000421490 332 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 AC063976.4-201ENST00000421971 163 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.54□□□□□ -2.16
NR2E3Q9Y5X4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 SNORD116-21-201ENST00000384507 92 ntBASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 AC245047.7-201ENST00000440265 293 ntBASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 RPS23P4-201ENST00000487908 423 ntBASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 AL391516.1-201ENST00000554380 2449 ntBASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 AL035470.1-201ENST00000622571 220 ntBASIC1.53□□□□□ -2.16
NR2E3Q9Y5X4 MIR222-201ENST00000384992 110 ntBASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 MIR216A-201ENST00000385063 110 ntBASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 AL022718.1-201ENST00000412004 84 ntBASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 AC113410.1-201ENST00000505029 247 ntBASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 AC087741.2-201ENST00000619415 172 ntBASIC1.52□□□□□ -2.17
NR2E3Q9Y5X4 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 SNORA25.3-201ENST00000363205 127 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 SNORA1.1-201ENST00000364671 133 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 Y_RNA.344-201ENST00000365381 112 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 AC244023.1-201ENST00000426884 112 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 AC007012.1-201ENST00000567192 175 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 MIR4679-2-201ENST00000578358 77 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 MIR3152-201ENST00000579801 74 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 AC242498.1-201ENST00000604134 111 ntBASIC1.51□□□□□ -2.17
NR2E3Q9Y5X4 Y_RNA.281-201ENST00000364774 94 ntBASIC1.5□□□□□ -2.17
NR2E3Q9Y5X4 MIR1185-1-201ENST00000408598 86 ntBASIC1.5□□□□□ -2.17
NR2E3Q9Y5X4 RPS3AP1-201ENST00000413190 320 ntBASIC1.5□□□□□ -2.17
NR2E3Q9Y5X4 AC048334.1-201ENST00000477975 159 ntBASIC1.5□□□□□ -2.17
NR2E3Q9Y5X4 RNU11-2P-201ENST00000516898 142 ntBASIC1.5□□□□□ -2.17
NR2E3Q9Y5X4 Y_RNA.213-201ENST00000364178 111 ntBASIC1.49□□□□□ -2.17
NR2E3Q9Y5X4 RNU6-755P-201ENST00000364400 103 ntBASIC1.49□□□□□ -2.17
NR2E3Q9Y5X4 Y_RNA.362-201ENST00000365518 110 ntBASIC1.49□□□□□ -2.17
NR2E3Q9Y5X4 RNU6-880P-201ENST00000384526 107 ntBASIC1.49□□□□□ -2.17
NR2E3Q9Y5X4 RNA5SP261-201ENST00000410536 106 ntBASIC1.49□□□□□ -2.17
NR2E3Q9Y5X4 RNU7-113P-201ENST00000459273 62 ntBASIC1.49□□□□□ -2.17
NR2E3Q9Y5X4 MIR548AE2-201ENST00000583456 67 ntBASIC1.49□□□□□ -2.17
NR2E3Q9Y5X4 MIR103A2-201ENST00000362154 78 ntBASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 SNORA63.4-201ENST00000362763 126 ntBASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 MIR548D2-201ENST00000384955 97 ntBASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 SNORD12C-201ENST00000386307 89 ntBASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 RNA5SP436-201ENST00000516020 115 ntBASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 Y_RNA.773-201ENST00000607168 90 ntBASIC1.48□□□□□ -2.17
NR2E3Q9Y5X4 RNU6-893P-201ENST00000458841 100 ntBASIC1.47□□□□□ -2.17
NR2E3Q9Y5X4 MIR3163-201ENST00000581592 73 ntBASIC1.47□□□□□ -2.17
NR2E3Q9Y5X4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.47□□□□□ -2.17
NR2E3Q9Y5X4 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
NR2E3Q9Y5X4 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 Y_RNA.85-201ENST00000363014 111 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 SNORD115-19-201ENST00000363098 82 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 SNORD115-18-201ENST00000363293 82 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 RNY4P6-201ENST00000363667 96 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 SNORD115-17-201ENST00000364612 82 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 SNORA40.6-201ENST00000391153 128 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 RNU4-69P-201ENST00000410677 143 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 RNA5SP33-201ENST00000516687 98 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 RNU7-6P-201ENST00000516845 62 ntBASIC1.46□□□□□ -2.18
NR2E3Q9Y5X4 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 315 ms