Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 SNORD114-1-201ENST00000362705 72 ntBASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 RNU1-36P-201ENST00000365130 165 ntBASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 RNU6-364P-201ENST00000384387 107 ntBASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 RNU6-1333P-201ENST00000516162 93 ntBASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 RNA5SP255-201ENST00000516370 107 ntBASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 MIR3914-2-201ENST00000637339 95 ntBASIC1.8□□□□□ -2.12
GTF3C3Q9Y5Q9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
GTF3C3Q9Y5Q9 U8.15-201ENST00000390947 134 ntBASIC1.79□□□□□ -2.12
GTF3C3Q9Y5Q9 AC133485.1-201ENST00000567176 124 ntBASIC1.79□□□□□ -2.12
GTF3C3Q9Y5Q9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
GTF3C3Q9Y5Q9 MIR4804-201ENST00000581683 73 ntBASIC1.78□□□□□ -2.12
GTF3C3Q9Y5Q9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.78□□□□□ -2.12
GTF3C3Q9Y5Q9 AC020891.4-201ENST00000605745 93 ntBASIC1.78□□□□□ -2.12
GTF3C3Q9Y5Q9 MIR520F-201ENST00000384824 87 ntBASIC1.77□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU1-119P-201ENST00000391122 165 ntBASIC1.77□□□□□ -2.13
GTF3C3Q9Y5Q9 SNORD67.1-201ENST00000516618 108 ntBASIC1.77□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU7-156P-201ENST00000517214 74 ntBASIC1.77□□□□□ -2.13
GTF3C3Q9Y5Q9 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU4-83P-201ENST00000410863 133 ntBASIC1.76□□□□□ -2.13
GTF3C3Q9Y5Q9 Y_RNA.630-201ENST00000411370 108 ntBASIC1.76□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU7-137P-201ENST00000516788 62 ntBASIC1.76□□□□□ -2.13
GTF3C3Q9Y5Q9 AL589743.1-201ENST00000551932 2712 ntBASIC1.76□□□□□ -2.13
GTF3C3Q9Y5Q9 SNORD105-201ENST00000386910 85 ntBASIC1.75□□□□□ -2.13
GTF3C3Q9Y5Q9 OR2A41P-201ENST00000473586 105 ntBASIC1.75□□□□□ -2.13
GTF3C3Q9Y5Q9 SNORD115-19-201ENST00000363098 82 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 SNORD115-18-201ENST00000363293 82 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 SNORD115-17-201ENST00000364612 82 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU6-53P-201ENST00000365367 106 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU6-22P-201ENST00000384355 107 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU6-406P-201ENST00000516470 107 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 AC087741.2-201ENST00000619415 172 ntBASIC1.74□□□□□ -2.13
GTF3C3Q9Y5Q9 MIR548D2-201ENST00000384955 97 ntBASIC1.73□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU7-56P-201ENST00000458744 62 ntBASIC1.73□□□□□ -2.13
GTF3C3Q9Y5Q9 SNORD92-201ENST00000585078 85 ntBASIC1.73□□□□□ -2.13
GTF3C3Q9Y5Q9 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU6-369P-201ENST00000362515 102 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 RNU6-403P-201ENST00000363163 104 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 SNORD113-1-201ENST00000365321 69 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 Y_RNA.563-201ENST00000384707 108 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 U8.13-201ENST00000390842 128 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 Y_RNA.649-201ENST00000459077 103 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 MIR4491-201ENST00000581087 68 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 RMST_2.1-201ENST00000617263 136 ntBASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.72□□□□□ -2.13
GTF3C3Q9Y5Q9 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR548A3-201ENST00000385297 97 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 MT-TI-201ENST00000387365 69 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR1285-1-201ENST00000408593 84 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 AC015818.7-201ENST00000428754 109 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 AC087499.7-201ENST00000441958 109 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU6-479P-201ENST00000516348 105 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR3945-201ENST00000581853 98 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 AL359881.1-201ENST00000602916 267 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 AL359821.1-201ENST00000605519 182 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.71□□□□□ -2.14
GTF3C3Q9Y5Q9 Y_RNA.98-201ENST00000363109 102 ntBASIC1.7□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR504-201ENST00000385065 83 ntBASIC1.7□□□□□ -2.14
GTF3C3Q9Y5Q9 AL606753.1-201ENST00000427435 87 ntBASIC1.7□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU7-2P-201ENST00000516096 62 ntBASIC1.7□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
GTF3C3Q9Y5Q9 SNORD115-35-201ENST00000365122 82 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU6-616P-201ENST00000384353 107 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU6-1168P-201ENST00000390831 104 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR1270-201ENST00000459320 83 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RN7SL429P-201ENST00000479090 223 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RN7SL489P-201ENST00000486185 223 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RN7SL327P-201ENST00000488659 223 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU6-313P-201ENST00000516317 112 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 AL670379.3-201ENST00000605040 251 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 RN7SL853P-201ENST00000617250 223 ntBASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.69□□□□□ -2.14
GTF3C3Q9Y5Q9 Y_RNA.525-201ENST00000384570 113 ntBASIC1.68□□□□□ -2.14
GTF3C3Q9Y5Q9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.68□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU6-295P-201ENST00000516901 104 ntBASIC1.68□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR4679-2-201ENST00000578358 77 ntBASIC1.68□□□□□ -2.14
GTF3C3Q9Y5Q9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.68□□□□□ -2.14
GTF3C3Q9Y5Q9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.68□□□□□ -2.14
GTF3C3Q9Y5Q9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR206-201ENST00000384872 86 ntBASIC1.67□□□□□ -2.14
GTF3C3Q9Y5Q9 snoU13.15-201ENST00000459407 104 ntBASIC1.67□□□□□ -2.14
GTF3C3Q9Y5Q9 AL365222.1-201ENST00000614661 98 ntBASIC1.67□□□□□ -2.14
GTF3C3Q9Y5Q9 RNY1P2-201ENST00000364820 117 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR520H-201ENST00000385126 88 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU6-1154P-201ENST00000391001 104 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 MIR1289-2-201ENST00000408360 111 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU7-102P-201ENST00000458948 62 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU6-765P-201ENST00000516916 99 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 DEFB131E-201ENST00000532329 154 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 AC105081.1-201ENST00000617727 106 ntBASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
GTF3C3Q9Y5Q9 RNU4-58P-201ENST00000363192 141 ntBASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.507-201ENST00000384500 99 ntBASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 SNORA72.6-201ENST00000384520 129 ntBASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU7-48P-201ENST00000458875 63 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms