Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 RNU6-239P-201ENST00000390990 99 ntBASIC0.74□□□□□ -2.29
KDM3AQ9Y4C1 AC004812.1-201ENST00000540773 146 ntBASIC0.74□□□□□ -2.29
KDM3AQ9Y4C1 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
KDM3AQ9Y4C1 AC020891.4-201ENST00000605745 93 ntBASIC0.74□□□□□ -2.29
KDM3AQ9Y4C1 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 RNU6-369P-201ENST00000362515 102 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 Y_RNA.29-201ENST00000362570 113 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 RNU4-16P-201ENST00000364737 141 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 AC244098.3-201ENST00000424803 96 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 Y_RNA.662-201ENST00000516028 97 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 uc_338.6-201ENST00000613544 171 ntBASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
KDM3AQ9Y4C1 Y_RNA.30-201ENST00000362572 97 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 Y_RNA.257-201ENST00000364596 102 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 RNU6-1318P-201ENST00000365389 103 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 SNORD18B-201ENST00000365659 72 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 RNU6-1336P-201ENST00000383886 109 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 MIR193B-201ENST00000384907 83 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 MIR573-201ENST00000384964 99 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 SNORD93-201ENST00000408813 74 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 RNU6-138P-201ENST00000515952 107 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 RNU7-156P-201ENST00000517214 74 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 AL662814.1-201ENST00000617364 121 ntBASIC0.72□□□□□ -2.29
KDM3AQ9Y4C1 MIR30D-201ENST00000362283 70 ntBASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 RNU4-45P-201ENST00000365469 141 ntBASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 SNORA36.2-201ENST00000384004 127 ntBASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 RNU7-56P-201ENST00000458744 62 ntBASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 MIR1273G-201ENST00000577677 100 ntBASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 MIR6841-201ENST00000637129 72 ntBASIC0.71□□□□□ -2.3
KDM3AQ9Y4C1 RNU4-84P-201ENST00000364200 139 ntBASIC0.7□□□□□ -2.3
KDM3AQ9Y4C1 Y_RNA.240-201ENST00000364469 95 ntBASIC0.7□□□□□ -2.3
KDM3AQ9Y4C1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.7□□□□□ -2.3
KDM3AQ9Y4C1 RNU5E-9P-201ENST00000411164 104 ntBASIC0.7□□□□□ -2.3
KDM3AQ9Y4C1 AL022718.1-201ENST00000412004 84 ntBASIC0.7□□□□□ -2.3
KDM3AQ9Y4C1 RNU7-120P-201ENST00000459334 63 ntBASIC0.7□□□□□ -2.3
KDM3AQ9Y4C1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
KDM3AQ9Y4C1 RNU6-690P-201ENST00000365242 106 ntBASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 SNORA81.3-201ENST00000517283 198 ntBASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 DNAJC19P2-201ENST00000593340 302 ntBASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 AC011603.4-201ENST00000611325 277 ntBASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
KDM3AQ9Y4C1 SNORA18-201ENST00000384416 132 ntBASIC0.68□□□□□ -2.3
KDM3AQ9Y4C1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.68□□□□□ -2.3
KDM3AQ9Y4C1 RNU6-588P-201ENST00000410281 105 ntBASIC0.68□□□□□ -2.3
KDM3AQ9Y4C1 RNA5SP193-201ENST00000410353 107 ntBASIC0.68□□□□□ -2.3
KDM3AQ9Y4C1 RNU7-102P-201ENST00000458948 62 ntBASIC0.68□□□□□ -2.3
KDM3AQ9Y4C1 RNU6-861P-201ENST00000516745 106 ntBASIC0.68□□□□□ -2.3
KDM3AQ9Y4C1 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
KDM3AQ9Y4C1 RNU4-83P-201ENST00000410863 133 ntBASIC0.67□□□□□ -2.3
KDM3AQ9Y4C1 AC092628.1-201ENST00000436250 252 ntBASIC0.67□□□□□ -2.3
KDM3AQ9Y4C1 RNU7-113P-201ENST00000459273 62 ntBASIC0.67□□□□□ -2.3
KDM3AQ9Y4C1 AC141846.1-201ENST00000568348 142 ntBASIC0.67□□□□□ -2.3
KDM3AQ9Y4C1 SNORD92-201ENST00000585078 85 ntBASIC0.67□□□□□ -2.3
KDM3AQ9Y4C1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
KDM3AQ9Y4C1 SNORD114-23-201ENST00000363536 72 ntBASIC0.66□□□□□ -2.3
KDM3AQ9Y4C1 Y_RNA.584-201ENST00000391090 114 ntBASIC0.66□□□□□ -2.3
KDM3AQ9Y4C1 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
KDM3AQ9Y4C1 MIR4711-201ENST00000578274 70 ntBASIC0.66□□□□□ -2.3
KDM3AQ9Y4C1 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
KDM3AQ9Y4C1 RNA5SP117-201ENST00000365294 118 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 Y_RNA.785-201ENST00000384290 109 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 RNA5SP144-201ENST00000410846 116 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 RNU6-1135P-201ENST00000411083 103 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 RNU7-121P-201ENST00000516604 62 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 RNU6-182P-201ENST00000516970 105 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 AC090897.1-201ENST00000580909 226 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.3
KDM3AQ9Y4C1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KDM3AQ9Y4C1 RNU6-349P-201ENST00000362402 107 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNU6-403P-201ENST00000363163 104 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNA5SP457-201ENST00000363657 124 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 AC004792.1-201ENST00000614523 137 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNU6-949P-201ENST00000384040 107 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNA5SP236-201ENST00000516169 116 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNU6-448P-201ENST00000517052 107 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 RNA5SP330-201ENST00000517096 96 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 AC133485.4-201ENST00000561835 220 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 AC138907.4-201ENST00000570107 226 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.64□□□□□ -2.31
KDM3AQ9Y4C1 AL589743.1-201ENST00000551932 2712 ntBASIC0.63□□□□□ -2.31
KDM3AQ9Y4C1 MIR18A-201ENST00000362310 71 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms