Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 AL512598.1-201ENST00000610158 273 ntBASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 SNORD114-10-201ENST00000363409 72 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 MIR206-201ENST00000384872 86 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-447P-201ENST00000410293 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-1118P-201ENST00000410382 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-1076P-201ENST00000410397 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-355P-201ENST00000410427 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-791P-201ENST00000410467 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-705P-201ENST00000410601 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-1100P-201ENST00000410691 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-860P-201ENST00000410860 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-1217P-201ENST00000411276 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-785P-201ENST00000411324 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 AC104435.1-201ENST00000483483 166 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU7-79P-201ENST00000516082 62 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 RNU6-922P-201ENST00000516753 99 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 MIR3192-201ENST00000584920 77 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 AC096720.1-201ENST00000604441 183 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 U6.90-201ENST00000614007 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 AC012531.4-201ENST00000616509 177 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 U6.70-201ENST00000620287 104 ntBASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SIT1Q9Y3P8 MIR302D-201ENST00000362275 68 ntBASIC1.85□□□□□ -2.11
SIT1Q9Y3P8 Y_RNA.95-201ENST00000363079 95 ntBASIC1.85□□□□□ -2.11
SIT1Q9Y3P8 SNORD73B-201ENST00000364394 72 ntBASIC1.85□□□□□ -2.11
SIT1Q9Y3P8 RNU6-1006P-201ENST00000516998 103 ntBASIC1.85□□□□□ -2.11
SIT1Q9Y3P8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
SIT1Q9Y3P8 AL096861.1-201ENST00000610899 123 ntBASIC1.85□□□□□ -2.11
SIT1Q9Y3P8 AC131280.1-202ENST00000624067 4211 ntBASIC1.85□□□□□ -2.11
SIT1Q9Y3P8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SIT1Q9Y3P8 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
SIT1Q9Y3P8 MIR1302-7-201ENST00000408841 72 ntBASIC1.84□□□□□ -2.11
SIT1Q9Y3P8 AP003716.2-201ENST00000528260 108 ntBASIC1.84□□□□□ -2.11
SIT1Q9Y3P8 MIR4777-201ENST00000583710 86 ntBASIC1.84□□□□□ -2.11
SIT1Q9Y3P8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.84□□□□□ -2.11
SIT1Q9Y3P8 AL512310.12-203ENST00000640543 90 ntBASIC1.84□□□□□ -2.11
SIT1Q9Y3P8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SIT1Q9Y3P8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 RNU6-60P-201ENST00000364792 103 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 RNY1P7-201ENST00000384743 110 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 UBL5P1-201ENST00000507979 193 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 RNU6-795P-201ENST00000516323 103 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 SNORD67.1-201ENST00000516618 108 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 RNU7-137P-201ENST00000516788 62 ntBASIC1.83□□□□□ -2.12
SIT1Q9Y3P8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 MT-TN-201ENST00000387400 73 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 MRPL35P3-201ENST00000421557 364 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 AC244023.1-201ENST00000426884 112 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 SNORA44.1-201ENST00000517031 108 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 AC242498.1-201ENST00000604134 111 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 AL137847.3-201ENST00000611521 109 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 MIR6840-201ENST00000611937 71 ntBASIC1.82□□□□□ -2.12
SIT1Q9Y3P8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 AL596028.1-201ENST00000326971 197 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 SNORD33-201ENST00000362761 85 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 SNORD38.1-201ENST00000363863 68 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 RNY1P13-201ENST00000365030 105 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 MIR563-201ENST00000385080 79 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 RNU6-1307P-201ENST00000391012 103 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 RNU6-644P-201ENST00000391155 98 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 snoU13.2-201ENST00000459201 104 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 AL133373.1-201ENST00000497098 94 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 RNU7-61P-201ENST00000515897 61 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 RNU11-2P-201ENST00000516898 142 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 MIR4255-201ENST00000579351 72 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 AL662814.1-201ENST00000617364 121 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 AC091304.10-201ENST00000641554 121 ntBASIC1.81□□□□□ -2.12
SIT1Q9Y3P8 Y_RNA.290-201ENST00000364879 114 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 RNU6-396P-201ENST00000365369 105 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 RPL39P39-201ENST00000455840 151 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 snoU13.9-201ENST00000458927 103 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 snoU13.25-201ENST00000458945 104 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 AC025033.1-201ENST00000463883 194 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 Y_RNA.659-201ENST00000515994 113 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 Y_RNA.705-201ENST00000516862 110 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 AC141846.1-201ENST00000568348 142 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 MIR4264-201ENST00000583520 66 ntBASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SIT1Q9Y3P8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 Y_RNA.448-201ENST00000384185 108 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 RNU6-1321P-201ENST00000390905 107 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 RNU6-972P-201ENST00000391208 107 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms