Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 RNU1-141P-201ENST00000364623 158 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 MIR635-201ENST00000384830 98 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 AL603914.1-201ENST00000401964 204 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 AL731563.1-201ENST00000442202 214 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 TRAJ51-201ENST00000504127 63 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 RNU7-137P-201ENST00000516788 62 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 RNU7-70P-201ENST00000516941 66 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 AL008718.3-201ENST00000610217 321 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.99□□□□□ -2.57
HDGFL3Q9Y3E1 RNU1-115P-201ENST00000365329 160 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 RNU6-47P-201ENST00000383866 107 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 MIR181B2-201ENST00000385004 89 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 MIR548F1-201ENST00000408667 84 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 RNU6-718P-201ENST00000516166 105 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 RNU6-1046P-201ENST00000516538 107 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 AC040926.1-201ENST00000530195 238 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 UBE2V2P2-201ENST00000587677 504 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 AC113139.1-201ENST00000605049 239 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD58B-201ENST00000607313 66 ntBASIC-1□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 MT-TQ-201ENST00000387372 72 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 SNORA53-201ENST00000391141 249 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 AL365205.2-201ENST00000594586 68 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 uc_338.10-201ENST00000621872 182 ntBASIC-1.01□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD114-10-201ENST00000363409 72 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 RNU4-16P-201ENST00000364737 141 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 SNORA3B-201ENST00000391305 131 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 MTND4LP30-201ENST00000454092 297 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD67.1-201ENST00000516618 108 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 AC026407.1-201ENST00000518369 204 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 snoU18.1-201ENST00000629629 71 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 AC093726.3-201ENST00000637588 150 ntBASIC-1.02□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD115-2-201ENST00000362842 82 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD115-20-201ENST00000365099 82 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD81.2-201ENST00000365153 76 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD116-2-201ENST00000384274 95 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 RNU6-455P-201ENST00000384681 107 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD116-6-201ENST00000384711 96 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 RNU4-63P-201ENST00000411313 118 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 MIR4473-201ENST00000583731 91 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 AL359881.1-201ENST00000602916 267 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 MIR376A1-201ENST00000616574 68 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 AC069503.3-201ENST00000618674 145 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 AC104985.2-201ENST00000620598 500 ntBASIC-1.03□□□□□ -2.57
HDGFL3Q9Y3E1 SNORD114-29-201ENST00000364819 70 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-662P-201ENST00000384253 104 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 MT-TT-201ENST00000387460 66 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 SNORD115-46-201ENST00000390982 71 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 RNU7-13P-201ENST00000516413 62 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 SCARNA15-202ENST00000516881 127 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-175P-201ENST00000516896 107 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 MTND5P40-201ENST00000559945 246 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 MTND4LP32-201ENST00000636111 270 ntBASIC-1.04□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 SNORD116-29-201ENST00000384516 83 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 MIR519A1-201ENST00000385257 85 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 RNY4P36-201ENST00000391116 96 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 RNA5SP144-201ENST00000410846 116 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 AC084782.3-201ENST00000612282 578 ntBASIC-1.05□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 SNORA32-201ENST00000384072 121 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 AC093423.1-201ENST00000440817 142 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 RNU7-113P-201ENST00000459273 62 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 RNA5SP33-201ENST00000516687 98 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 AC092794.1-201ENST00000612734 582 ntBASIC-1.06□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 SNORD114-15-201ENST00000364687 72 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-326P-201ENST00000365480 107 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 MIR9-2-201ENST00000384838 87 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 SNORA27.4-201ENST00000516650 95 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-570P-201ENST00000517051 105 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 RNA5SP169-201ENST00000517268 117 ntBASIC-1.07□□□□□ -2.58
HDGFL3Q9Y3E1 SNORA25.1-201ENST00000362326 128 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 RNU6-290P-201ENST00000365212 101 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms