Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 SNORD53B-201ENST00000577887 78 ntBASIC1.93□□□□□ -2.1
PTPN22Q9Y2R2 MIR8055-201ENST00000610739 97 ntBASIC1.93□□□□□ -2.1
PTPN22Q9Y2R2 MIR2052-201ENST00000636055 55 ntBASIC1.93□□□□□ -2.1
PTPN22Q9Y2R2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
PTPN22Q9Y2R2 SNORA51.10-201ENST00000384418 136 ntBASIC1.92□□□□□ -2.1
PTPN22Q9Y2R2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 Y_RNA.93-201ENST00000363066 109 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 RNU4-36P-201ENST00000364294 144 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 RNY4P30-201ENST00000410216 95 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 RNU6-917P-201ENST00000516294 104 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 RNU6-970P-201ENST00000516312 107 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 SNORA77B-201ENST00000578179 125 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 MIR4694-201ENST00000578534 80 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 MIR4422-201ENST00000581938 83 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 Z97988.1-201ENST00000637697 135 ntBASIC1.91□□□□□ -2.1
PTPN22Q9Y2R2 Y_RNA.10-201ENST00000362371 110 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-1099P-201ENST00000363533 107 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 RNU4-67P-201ENST00000364569 141 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 SNORD77B-201ENST00000391112 67 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 SNORA19.1-201ENST00000410656 129 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 RPS3AP1-201ENST00000413190 320 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 MTATP8P2-201ENST00000435212 202 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 AC079140.2-201ENST00000506193 142 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 AC008133.2-201ENST00000624540 351 ntBASIC1.9□□□□□ -2.11
PTPN22Q9Y2R2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 RNY3P2-201ENST00000362918 102 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 MIR1302-4-201ENST00000408701 150 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-322P-201ENST00000516010 103 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 RNA5SP33-201ENST00000516687 98 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 DEFB131E-201ENST00000532329 154 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 AC141557.1-201ENST00000540982 400 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 MIR3937-201ENST00000580135 106 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 MIR548AE2-201ENST00000583456 67 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 FAM71BP1-201ENST00000604431 523 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 MIR1255B1-201ENST00000636325 63 ntBASIC1.89□□□□□ -2.11
PTPN22Q9Y2R2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 SNORA1.1-201ENST00000364671 133 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-409P-201ENST00000384114 104 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.601-201ENST00000410500 113 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-733P-201ENST00000410759 104 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 AC096949.1-201ENST00000412047 152 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 MIR1270-201ENST00000459320 83 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-109P-201ENST00000516364 107 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-184P-201ENST00000516514 107 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-1018P-201ENST00000516577 106 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 MIR4421-201ENST00000578133 69 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 AL157834.3-201ENST00000615543 103 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 AC022709.1-201ENST00000615967 87 ntBASIC1.88□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.360-201ENST00000365512 102 ntBASIC1.87□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.377-201ENST00000365644 108 ntBASIC1.87□□□□□ -2.11
PTPN22Q9Y2R2 SCARNA23-201ENST00000516060 130 ntBASIC1.87□□□□□ -2.11
PTPN22Q9Y2R2 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.107-201ENST00000363190 121 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-832P-201ENST00000363319 107 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 Y_RNA.155-201ENST00000363632 101 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 MIR520C-201ENST00000385005 87 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 MIR577-201ENST00000385196 96 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 AL353813.1-201ENST00000440700 253 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 MIR8065-201ENST00000620577 100 ntBASIC1.86□□□□□ -2.11
PTPN22Q9Y2R2 ZNF209P-201ENST00000593450 2304 ntBASIC1.85□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-616P-201ENST00000384353 107 ntBASIC1.85□□□□□ -2.11
PTPN22Q9Y2R2 SNORA67.6-201ENST00000391093 99 ntBASIC1.85□□□□□ -2.11
PTPN22Q9Y2R2 MIR6515-201ENST00000619843 57 ntBASIC1.85□□□□□ -2.11
PTPN22Q9Y2R2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PTPN22Q9Y2R2 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 SNORD1A-201ENST00000364968 72 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-294P-201ENST00000364999 102 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-53P-201ENST00000365367 106 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 MIR488-201ENST00000365739 83 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 RNU6-679P-201ENST00000391003 106 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 RNU1-78P-201ENST00000391248 165 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 AL451046.2-201ENST00000403074 277 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 HMGN1P33-201ENST00000432945 451 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 RNU1-92P-201ENST00000517017 135 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 RNU7-35P-201ENST00000517174 62 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 AL513534.2-201ENST00000603836 250 ntBASIC1.84□□□□□ -2.11
PTPN22Q9Y2R2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
PTPN22Q9Y2R2 RNU6-49P-201ENST00000384256 107 ntBASIC1.83□□□□□ -2.12
PTPN22Q9Y2R2 Y_RNA.558-201ENST00000384685 113 ntBASIC1.83□□□□□ -2.12
PTPN22Q9Y2R2 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
PTPN22Q9Y2R2 PVT1_3.1-201ENST00000620853 95 ntBASIC1.83□□□□□ -2.12
PTPN22Q9Y2R2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PTPN22Q9Y2R2 RNU6-1313P-201ENST00000362622 102 ntBASIC1.82□□□□□ -2.12
PTPN22Q9Y2R2 RNA5SP48-201ENST00000363969 126 ntBASIC1.82□□□□□ -2.12
PTPN22Q9Y2R2 Y_RNA.220-201ENST00000364244 109 ntBASIC1.82□□□□□ -2.12
PTPN22Q9Y2R2 RNU6-1131P-201ENST00000364955 107 ntBASIC1.82□□□□□ -2.12
PTPN22Q9Y2R2 MIR605-201ENST00000385078 83 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms