Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SNORD116-4-201ENST00000384733 96 ntBASIC-0.62□□□□□ -2.51
HHLA3Q9XRX5 MTND4LP11-201ENST00000422184 280 ntBASIC-0.62□□□□□ -2.51
HHLA3Q9XRX5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.62□□□□□ -2.51
HHLA3Q9XRX5 AC105081.1-201ENST00000617727 106 ntBASIC-0.62□□□□□ -2.51
HHLA3Q9XRX5 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 RNY3P5-201ENST00000384127 102 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 RNU6-876P-201ENST00000391295 104 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 FGF7P6-202ENST00000451282 293 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 MIR548H5-201ENST00000580314 60 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 MIR4493-201ENST00000584016 73 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 AC112487.2-201ENST00000637950 304 ntBASIC-0.63□□□□□ -2.51
HHLA3Q9XRX5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 MIR101-1-201ENST00000362265 75 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 RNA5SP98-201ENST00000363158 137 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 RNU6-509P-201ENST00000363519 107 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 RNU6-290P-201ENST00000365212 101 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 RPS29P8-201ENST00000445109 171 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 RNU6-893P-201ENST00000458841 100 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 SNORA27.4-201ENST00000516650 95 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 RNU7-137P-201ENST00000516788 62 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 RNU7-70P-201ENST00000516941 66 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 AL365205.2-201ENST00000594586 68 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 AL391099.1-201ENST00000624635 187 ntBASIC-0.64□□□□□ -2.51
HHLA3Q9XRX5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 SNORA25.1-201ENST00000362326 128 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 RNU6-449P-201ENST00000383914 107 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 RNU4-70P-201ENST00000384579 139 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 AL606845.1-201ENST00000404881 255 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 TRAJ51-201ENST00000504127 63 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 SNORD67.1-201ENST00000516618 108 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 RNU6-453P-201ENST00000516819 85 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 AL359881.1-201ENST00000602916 267 ntBASIC-0.65□□□□□ -2.51
HHLA3Q9XRX5 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 SNORA25.7-201ENST00000364375 127 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 RNU6-326P-201ENST00000365480 107 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 RNU6-211P-201ENST00000384047 107 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 MIR599-201ENST00000385069 95 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 RNU6-121P-201ENST00000410525 99 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 MTND4LP30-201ENST00000454092 297 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 SCARNA15-202ENST00000516881 127 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 MIR4636-201ENST00000582271 80 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 AC098479.1-201ENST00000609225 154 ntBASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.66□□□□□ -2.52
HHLA3Q9XRX5 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 SNORA32-201ENST00000384072 121 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 RNU6-429P-201ENST00000384582 108 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 SNORA53-201ENST00000391141 249 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 MIR1302-11-201ENST00000408051 138 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 MIR1302-9-201ENST00000408365 138 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 MIR1302-10-201ENST00000408734 138 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 MIR3920-201ENST00000581751 86 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 MIR1302-2-201ENST00000607096 138 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 MIR1302-1-201ENST00000637932 143 ntBASIC-0.67□□□□□ -2.52
HHLA3Q9XRX5 RNU4-84P-201ENST00000364200 139 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 MIR635-201ENST00000384830 98 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 RNA5SP144-201ENST00000410846 116 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 AC082651.2-201ENST00000496833 166 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 RNU6-976P-201ENST00000516086 111 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 RNU6-561P-201ENST00000516222 102 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 RNU7-188P-201ENST00000517063 64 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 AC006504.6-201ENST00000590142 199 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 RNU7-10P-201ENST00000607194 63 ntBASIC-0.68□□□□□ -2.52
HHLA3Q9XRX5 UBE2WP1-201ENST00000362030 340 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 RNU4-73P-201ENST00000363164 141 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 AC097635.1-201ENST00000450678 155 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 RNU7-113P-201ENST00000459273 62 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 RNA5SP33-201ENST00000516687 98 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 MIR4436A-201ENST00000585278 85 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 AC037487.3-201ENST00000606668 112 ntBASIC-0.69□□□□□ -2.52
HHLA3Q9XRX5 SNORD115-2-201ENST00000362842 82 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 SNORD114-10-201ENST00000363409 72 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 RNU1-141P-201ENST00000364623 158 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 SNORD115-20-201ENST00000365099 82 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 MIR616-201ENST00000385293 97 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 SNORD19B-201ENST00000459623 84 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 MIR4473-201ENST00000583731 91 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 AL132765.2-201ENST00000610812 351 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 AC090574.1-201ENST00000623186 233 ntBASIC-0.7□□□□□ -2.52
HHLA3Q9XRX5 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms