Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL137067.1-201ENST00000615933 120 ntBASIC1.56□□□□□ -2.16
CDK11AQ9UQ88 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
CDK11AQ9UQ88 RNU6-205P-201ENST00000390858 107 ntBASIC1.55□□□□□ -2.16
CDK11AQ9UQ88 POLR2J4-204ENST00000418424 324 ntBASIC1.55□□□□□ -2.16
CDK11AQ9UQ88 SUMO1P3-201ENST00000439961 304 ntBASIC1.55□□□□□ -2.16
CDK11AQ9UQ88 RNU7-62P-201ENST00000458856 62 ntBASIC1.55□□□□□ -2.16
CDK11AQ9UQ88 AC106800.4-201ENST00000614905 153 ntBASIC1.55□□□□□ -2.16
CDK11AQ9UQ88 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.55□□□□□ -2.16
CDK11AQ9UQ88 RNU6-580P-201ENST00000365159 107 ntBASIC1.54□□□□□ -2.16
CDK11AQ9UQ88 RNU6-187P-201ENST00000384139 106 ntBASIC1.54□□□□□ -2.16
CDK11AQ9UQ88 RNU7-164P-201ENST00000459221 62 ntBASIC1.54□□□□□ -2.16
CDK11AQ9UQ88 RNU7-113P-201ENST00000459273 62 ntBASIC1.54□□□□□ -2.16
CDK11AQ9UQ88 AC036111.3-201ENST00000526389 112 ntBASIC1.54□□□□□ -2.16
CDK11AQ9UQ88 SNORD114-24-201ENST00000365029 72 ntBASIC1.53□□□□□ -2.16
CDK11AQ9UQ88 Y_RNA.366-201ENST00000365540 102 ntBASIC1.53□□□□□ -2.16
CDK11AQ9UQ88 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.53□□□□□ -2.16
CDK11AQ9UQ88 snoU13.2-201ENST00000459201 104 ntBASIC1.53□□□□□ -2.16
CDK11AQ9UQ88 AC023827.1-201ENST00000569247 97 ntBASIC1.53□□□□□ -2.16
CDK11AQ9UQ88 MIR588-201ENST00000384900 83 ntBASIC1.52□□□□□ -2.17
CDK11AQ9UQ88 SNORD12C-201ENST00000386307 89 ntBASIC1.52□□□□□ -2.17
CDK11AQ9UQ88 Y_RNA.586-201ENST00000391146 98 ntBASIC1.52□□□□□ -2.17
CDK11AQ9UQ88 RNA5SP95-201ENST00000410319 137 ntBASIC1.52□□□□□ -2.17
CDK11AQ9UQ88 RNA5SP237-201ENST00000410414 113 ntBASIC1.52□□□□□ -2.17
CDK11AQ9UQ88 AC113410.1-201ENST00000505029 247 ntBASIC1.52□□□□□ -2.17
CDK11AQ9UQ88 AL158147.1-201ENST00000443970 75 ntBASIC1.51□□□□□ -2.17
CDK11AQ9UQ88 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.51□□□□□ -2.17
CDK11AQ9UQ88 MIR5000-201ENST00000577717 103 ntBASIC1.51□□□□□ -2.17
CDK11AQ9UQ88 MIR3973-201ENST00000579824 107 ntBASIC1.51□□□□□ -2.17
CDK11AQ9UQ88 Y_RNA.298-201ENST00000364960 107 ntBASIC1.5□□□□□ -2.17
CDK11AQ9UQ88 RNU6-994P-201ENST00000410507 111 ntBASIC1.5□□□□□ -2.17
CDK11AQ9UQ88 AC067940.1-201ENST00000458411 300 ntBASIC1.5□□□□□ -2.17
CDK11AQ9UQ88 RNU6-1211P-201ENST00000459179 105 ntBASIC1.5□□□□□ -2.17
CDK11AQ9UQ88 CYP3A137P-201ENST00000562436 69 ntBASIC1.5□□□□□ -2.17
CDK11AQ9UQ88 AC108081.1-201ENST00000604358 221 ntBASIC1.5□□□□□ -2.17
CDK11AQ9UQ88 SNORD115-2-201ENST00000362842 82 ntBASIC1.49□□□□□ -2.17
CDK11AQ9UQ88 Y_RNA.294-201ENST00000364916 102 ntBASIC1.49□□□□□ -2.17
CDK11AQ9UQ88 SNORD115-20-201ENST00000365099 82 ntBASIC1.49□□□□□ -2.17
CDK11AQ9UQ88 Y_RNA.531-201ENST00000384589 121 ntBASIC1.49□□□□□ -2.17
CDK11AQ9UQ88 TMSB4XP3-201ENST00000445144 114 ntBASIC1.49□□□□□ -2.17
CDK11AQ9UQ88 RPS29P28-201ENST00000446439 141 ntBASIC1.49□□□□□ -2.17
CDK11AQ9UQ88 AC004812.1-201ENST00000540773 146 ntBASIC1.49□□□□□ -2.17
CDK11AQ9UQ88 Y_RNA.171-201ENST00000363760 102 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 Y_RNA.280-201ENST00000364765 112 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 Y_RNA.299-201ENST00000364973 94 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 RNU6-1165P-201ENST00000410119 107 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 FABP5P4-201ENST00000437203 171 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 MIR18B-201ENST00000454574 71 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 RNU7-123P-201ENST00000515911 60 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 RN7SKP19-201ENST00000516016 252 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 RNU2-35P-201ENST00000516446 142 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 RNA5SP33-201ENST00000516687 98 ntBASIC1.48□□□□□ -2.17
CDK11AQ9UQ88 RNA5SP136-201ENST00000410906 107 ntBASIC1.47□□□□□ -2.17
CDK11AQ9UQ88 SNORD124-201ENST00000459577 104 ntBASIC1.47□□□□□ -2.17
CDK11AQ9UQ88 PDCD5P2-201ENST00000507570 312 ntBASIC1.47□□□□□ -2.17
CDK11AQ9UQ88 MIR6740-201ENST00000618268 113 ntBASIC1.47□□□□□ -2.17
CDK11AQ9UQ88 SNORA22-201ENST00000383907 134 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 SNORA18-201ENST00000384416 132 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 SNORA22C-201ENST00000384614 134 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 RNU6-1237P-201ENST00000384777 107 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 MIR563-201ENST00000385080 79 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 MT-TF-201ENST00000387314 71 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 AL512326.2-201ENST00000426359 151 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 RNY4P20-201ENST00000516678 93 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 RNU6-1258P-201ENST00000516911 111 ntBASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.46□□□□□ -2.18
CDK11AQ9UQ88 MIR759-201ENST00000390224 91 ntBASIC1.45□□□□□ -2.18
CDK11AQ9UQ88 RPL39P25-201ENST00000449384 154 ntBASIC1.45□□□□□ -2.18
CDK11AQ9UQ88 RNU6-971P-201ENST00000516920 106 ntBASIC1.45□□□□□ -2.18
CDK11AQ9UQ88 AL662814.1-201ENST00000617364 121 ntBASIC1.45□□□□□ -2.18
CDK11AQ9UQ88 RNU6-934P-201ENST00000365154 107 ntBASIC1.44□□□□□ -2.18
CDK11AQ9UQ88 Y_RNA.617-201ENST00000410920 90 ntBASIC1.44□□□□□ -2.18
CDK11AQ9UQ88 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.44□□□□□ -2.18
CDK11AQ9UQ88 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDK11AQ9UQ88 MIR942-201ENST00000401111 86 ntBASIC1.43□□□□□ -2.18
CDK11AQ9UQ88 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.43□□□□□ -2.18
CDK11AQ9UQ88 RNU6-1086P-201ENST00000410930 100 ntBASIC1.43□□□□□ -2.18
CDK11AQ9UQ88 RNU6-94P-201ENST00000607728 107 ntBASIC1.43□□□□□ -2.18
CDK11AQ9UQ88 AL136317.1-201ENST00000612653 226 ntBASIC1.43□□□□□ -2.18
CDK11AQ9UQ88 RNU6-235P-201ENST00000362644 107 ntBASIC1.42□□□□□ -2.18
CDK11AQ9UQ88 RNU1-36P-201ENST00000365130 165 ntBASIC1.42□□□□□ -2.18
CDK11AQ9UQ88 RNU6-80P-201ENST00000384195 107 ntBASIC1.42□□□□□ -2.18
CDK11AQ9UQ88 Y_RNA.470-201ENST00000384307 117 ntBASIC1.42□□□□□ -2.18
CDK11AQ9UQ88 MIR1-1-201ENST00000362147 71 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 Y_RNA.36-201ENST00000362602 112 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 Y_RNA.213-201ENST00000364178 111 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 MIR1263-201ENST00000408324 86 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 RNU4-69P-201ENST00000410677 143 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 RNA5SP436-201ENST00000516020 115 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 RNU6-1061P-201ENST00000516530 99 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 IGKV1-22-201ENST00000524313 326 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 MIR6779-201ENST00000617283 64 ntBASIC1.41□□□□□ -2.18
CDK11AQ9UQ88 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
CDK11AQ9UQ88 COX6CP6-201ENST00000490840 228 ntBASIC1.4□□□□□ -2.19
CDK11AQ9UQ88 AC141846.1-201ENST00000568348 142 ntBASIC1.4□□□□□ -2.19
CDK11AQ9UQ88 MIR30D-201ENST00000362283 70 ntBASIC1.39□□□□□ -2.19
CDK11AQ9UQ88 RPS26P5-201ENST00000418544 335 ntBASIC1.39□□□□□ -2.19
CDK11AQ9UQ88 RNU7-35P-201ENST00000517174 62 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms