Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU7-171P-201ENST00000459581 62 ntBASIC2.81□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP445-201ENST00000515889 115 ntBASIC2.81□□□□□ -1.96
ZC3H4Q9UPT8 AC025521.1-201ENST00000621624 286 ntBASIC2.81□□□□□ -1.96
ZC3H4Q9UPT8 SNORD38B-202ENST00000625943 69 ntBASIC2.81□□□□□ -1.96
ZC3H4Q9UPT8 SNORD114-10-201ENST00000363409 72 ntBASIC2.8□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-1244P-201ENST00000363614 108 ntBASIC2.8□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-787P-201ENST00000384032 107 ntBASIC2.8□□□□□ -1.96
ZC3H4Q9UPT8 RNU1-98P-201ENST00000458992 160 ntBASIC2.8□□□□□ -1.96
ZC3H4Q9UPT8 MIR3935-201ENST00000583472 104 ntBASIC2.8□□□□□ -1.96
ZC3H4Q9UPT8 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
ZC3H4Q9UPT8 RNU1-17P-201ENST00000363022 152 ntBASIC2.79□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-360P-201ENST00000390944 104 ntBASIC2.79□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP212-201ENST00000391223 107 ntBASIC2.79□□□□□ -1.96
ZC3H4Q9UPT8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.79□□□□□ -1.96
ZC3H4Q9UPT8 RNU7-41P-201ENST00000515917 61 ntBASIC2.79□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP402-201ENST00000517148 110 ntBASIC2.79□□□□□ -1.96
ZC3H4Q9UPT8 AC080100.1-201ENST00000624239 5356 ntBASIC2.78□□□□□ -1.96
ZC3H4Q9UPT8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP276-201ENST00000362580 94 ntBASIC2.78□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP259-201ENST00000365541 109 ntBASIC2.78□□□□□ -1.96
ZC3H4Q9UPT8 AC019129.1-201ENST00000403786 261 ntBASIC2.78□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
ZC3H4Q9UPT8 MIR548BB-201ENST00000626714 66 ntBASIC2.78□□□□□ -1.96
ZC3H4Q9UPT8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
ZC3H4Q9UPT8 MIR337-201ENST00000362281 93 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 Y_RNA.98-201ENST00000363109 102 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-509P-201ENST00000363519 107 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-447P-201ENST00000410293 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-1118P-201ENST00000410382 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-1076P-201ENST00000410397 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-355P-201ENST00000410427 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-791P-201ENST00000410467 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-705P-201ENST00000410601 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-1100P-201ENST00000410691 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-860P-201ENST00000410860 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-1217P-201ENST00000411276 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-785P-201ENST00000411324 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 RNA5SP233-201ENST00000459153 113 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 SNORD111.1-201ENST00000516421 86 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 AC133485.1-201ENST00000567176 124 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 MIR4666B-201ENST00000578142 81 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 MIR6845-201ENST00000613182 61 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 U6.90-201ENST00000614007 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 AC012676.2-201ENST00000619258 186 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 U6.70-201ENST00000620287 104 ntBASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZC3H4Q9UPT8 Y_RNA.221-201ENST00000364248 96 ntBASIC2.76□□□□□ -1.97
ZC3H4Q9UPT8 Y_RNA.355-201ENST00000365462 98 ntBASIC2.76□□□□□ -1.97
ZC3H4Q9UPT8 AP001362.1-201ENST00000625165 124 ntBASIC2.76□□□□□ -1.97
ZC3H4Q9UPT8 RNY1P13-201ENST00000365030 105 ntBASIC2.75□□□□□ -1.97
ZC3H4Q9UPT8 RNA5SP210-201ENST00000391034 120 ntBASIC2.75□□□□□ -1.97
ZC3H4Q9UPT8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.75□□□□□ -1.97
ZC3H4Q9UPT8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.75□□□□□ -1.97
ZC3H4Q9UPT8 AC006160.2-201ENST00000637708 154 ntBASIC2.75□□□□□ -1.97
ZC3H4Q9UPT8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ZC3H4Q9UPT8 SNORA16B-201ENST00000364674 135 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-652P-201ENST00000365488 107 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 MIR499A-201ENST00000384903 122 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-279P-201ENST00000391297 101 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 AC004965.1-201ENST00000413033 213 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 AC009474.2-201ENST00000451383 136 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-857P-201ENST00000515893 110 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 AC141846.1-201ENST00000568348 142 ntBASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZC3H4Q9UPT8 RPS27P21-201ENST00000486977 252 ntBASIC2.73□□□□□ -1.97
ZC3H4Q9UPT8 RNA5SP200-201ENST00000516360 103 ntBASIC2.73□□□□□ -1.97
ZC3H4Q9UPT8 RNA5SP395-201ENST00000516567 118 ntBASIC2.73□□□□□ -1.97
ZC3H4Q9UPT8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.73□□□□□ -1.97
ZC3H4Q9UPT8 MIR181B2-201ENST00000385004 89 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 MIR513A1-201ENST00000385138 129 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-321P-201ENST00000410912 106 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 AC108667.1-201ENST00000428618 249 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 MIR514B-201ENST00000516774 80 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 AL773524.1-201ENST00000614065 229 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 MIR6132-201ENST00000622083 109 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ZC3H4Q9UPT8 RNU6-633P-201ENST00000362612 103 ntBASIC2.71□□□□□ -1.98
ZC3H4Q9UPT8 RNA5SP48-201ENST00000363969 126 ntBASIC2.71□□□□□ -1.98
ZC3H4Q9UPT8 MIR221-201ENST00000385135 110 ntBASIC2.71□□□□□ -1.98
ZC3H4Q9UPT8 AC244636.1-201ENST00000421152 228 ntBASIC2.71□□□□□ -1.98
ZC3H4Q9UPT8 RNU6-922P-201ENST00000516753 99 ntBASIC2.71□□□□□ -1.98
ZC3H4Q9UPT8 AL513043.2-201ENST00000573941 143 ntBASIC2.71□□□□□ -1.98
ZC3H4Q9UPT8 AL627230.6-201ENST00000611129 280 ntBASIC2.71□□□□□ -1.98
ZC3H4Q9UPT8 RNU6-480P-201ENST00000384332 107 ntBASIC2.7□□□□□ -1.98
ZC3H4Q9UPT8 MIR8070-201ENST00000616510 88 ntBASIC2.7□□□□□ -1.98
ZC3H4Q9UPT8 AL662814.1-201ENST00000617364 121 ntBASIC2.7□□□□□ -1.98
ZC3H4Q9UPT8 AL596028.1-201ENST00000326971 197 ntBASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 Y_RNA.168-201ENST00000363740 102 ntBASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 MIR144-201ENST00000384886 86 ntBASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 MIR518E-201ENST00000385252 88 ntBASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 Y_RNA.607-201ENST00000410597 98 ntBASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 SNORA31.11-201ENST00000516528 139 ntBASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZC3H4Q9UPT8 Y_RNA.173-201ENST00000363776 113 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 SNORD115-27-201ENST00000364430 82 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 SNORA67.3-201ENST00000384366 140 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 239.1 ms