Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 RNU7-41P-201ENST00000515917 61 ntBASIC1.5□□□□□ -2.17
SCAF8Q9UPN6 RNU6-1258P-201ENST00000516911 111 ntBASIC1.5□□□□□ -2.17
SCAF8Q9UPN6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
SCAF8Q9UPN6 MIR6717-201ENST00000622747 73 ntBASIC1.5□□□□□ -2.17
SCAF8Q9UPN6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 SNORA22.1-201ENST00000362701 134 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 MIR759-201ENST00000390224 91 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 RNA5SP261-201ENST00000410536 106 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 HMGN1P33-201ENST00000432945 451 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 PDCD5P2-201ENST00000507570 312 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 AC004812.1-201ENST00000540773 146 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 MIR8055-201ENST00000610739 97 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 MIR6841-201ENST00000637129 72 ntBASIC1.49□□□□□ -2.17
SCAF8Q9UPN6 RNY4P6-201ENST00000363667 96 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 Y_RNA.281-201ENST00000364774 94 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 Y_RNA.531-201ENST00000384589 121 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 RNU6-893P-201ENST00000458841 100 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 SNORD111.1-201ENST00000516421 86 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 CYP3A52P-201ENST00000563326 91 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 MIR4251-201ENST00000635819 61 ntBASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SCAF8Q9UPN6 RNU6-755P-201ENST00000364400 103 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 RNU6-153P-201ENST00000364422 104 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 SNORD12C-201ENST00000386307 89 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 RNU7-113P-201ENST00000459273 62 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 AL133373.1-201ENST00000497098 94 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 MIR4679-2-201ENST00000578358 77 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 MIR548AO-201ENST00000579992 96 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 MIR3163-201ENST00000581592 73 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 AL035470.1-201ENST00000622571 220 ntBASIC1.47□□□□□ -2.17
SCAF8Q9UPN6 SNORA1.1-201ENST00000364671 133 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 Y_RNA.362-201ENST00000365518 110 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 RPS3AP1-201ENST00000413190 320 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 RPS23P4-201ENST00000487908 423 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 RNU6-412P-201ENST00000516434 106 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 RNU6-165P-201ENST00000517170 99 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 MIR3192-201ENST00000584920 77 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 MIR6788-201ENST00000618842 66 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 Z97988.1-201ENST00000637697 135 ntBASIC1.46□□□□□ -2.18
SCAF8Q9UPN6 SNORD114-26-201ENST00000363543 72 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 Y_RNA.470-201ENST00000384307 117 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 MIR548D2-201ENST00000384955 97 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 AC113410.1-201ENST00000505029 247 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 AL096861.1-201ENST00000610899 123 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
SCAF8Q9UPN6 SNORD115-2-201ENST00000362842 82 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 SNORA63.5-201ENST00000363548 123 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 RNA5SP48-201ENST00000363969 126 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 RNU6-1107P-201ENST00000364817 104 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 SNORD115-20-201ENST00000365099 82 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 AC090844.1-201ENST00000422019 156 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 MIR151B-201ENST00000584249 96 ntBASIC1.44□□□□□ -2.18
SCAF8Q9UPN6 AL589743.1-201ENST00000551932 2712 ntBASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 Y_RNA.299-201ENST00000364973 94 ntBASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 RNU6-947P-201ENST00000516264 106 ntBASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 RNA5SP33-201ENST00000516687 98 ntBASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 MIR548AE2-201ENST00000583456 67 ntBASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 AC087741.2-201ENST00000619415 172 ntBASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
SCAF8Q9UPN6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SCAF8Q9UPN6 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
SCAF8Q9UPN6 RNU4-69P-201ENST00000410677 143 ntBASIC1.42□□□□□ -2.18
SCAF8Q9UPN6 RNU6-602P-201ENST00000411155 105 ntBASIC1.42□□□□□ -2.18
SCAF8Q9UPN6 AC245047.7-201ENST00000440265 293 ntBASIC1.42□□□□□ -2.18
SCAF8Q9UPN6 snoU13.25-201ENST00000458945 104 ntBASIC1.42□□□□□ -2.18
SCAF8Q9UPN6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SCAF8Q9UPN6 Y_RNA.205-201ENST00000364128 113 ntBASIC1.41□□□□□ -2.18
SCAF8Q9UPN6 MIR598-201ENST00000384868 97 ntBASIC1.41□□□□□ -2.18
SCAF8Q9UPN6 RPL39P34-201ENST00000477141 156 ntBASIC1.41□□□□□ -2.18
SCAF8Q9UPN6 uc_338.28-201ENST00000612082 187 ntBASIC1.41□□□□□ -2.18
SCAF8Q9UPN6 Y_RNA.49-201ENST00000362714 112 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 SNORA25.3-201ENST00000363205 127 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 RNU6-147P-201ENST00000383983 107 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 RNU6-106P-201ENST00000384405 107 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 MIR1270-201ENST00000459320 83 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 RNU11-2P-201ENST00000516898 142 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.4□□□□□ -2.19
SCAF8Q9UPN6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCAF8Q9UPN6 SNORD115-19-201ENST00000363098 82 ntBASIC1.39□□□□□ -2.19
SCAF8Q9UPN6 SNORD115-18-201ENST00000363293 82 ntBASIC1.39□□□□□ -2.19
SCAF8Q9UPN6 SNORD115-17-201ENST00000364612 82 ntBASIC1.39□□□□□ -2.19
SCAF8Q9UPN6 Y_RNA.323-201ENST00000365157 109 ntBASIC1.39□□□□□ -2.19
SCAF8Q9UPN6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.39□□□□□ -2.19
SCAF8Q9UPN6 SNORA32-201ENST00000384072 121 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms