Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU7-28P-201ENST00000516759 62 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 SNORA22.1-201ENST00000362701 134 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 MIR29C-201ENST00000385231 88 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 RNU6-747P-201ENST00000390928 104 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 RNU6-241P-201ENST00000391148 104 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 RNU6-587P-201ENST00000391282 106 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 RNU6-177P-201ENST00000411257 104 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 AC093423.1-201ENST00000440817 142 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 AL163195.1-201ENST00000496941 348 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 MIR5194-201ENST00000582634 120 ntBASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.76□□□□□ -1.97
COL17A1Q9UMD9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL17A1Q9UMD9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL17A1Q9UMD9 MIR96-201ENST00000362288 78 ntBASIC2.75□□□□□ -1.97
COL17A1Q9UMD9 RNA5SP482-201ENST00000391269 118 ntBASIC2.75□□□□□ -1.97
COL17A1Q9UMD9 RNU6-1190P-201ENST00000410811 104 ntBASIC2.75□□□□□ -1.97
COL17A1Q9UMD9 AC025033.1-201ENST00000463883 194 ntBASIC2.75□□□□□ -1.97
COL17A1Q9UMD9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 RNU6-862P-201ENST00000362804 105 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 Y_RNA.168-201ENST00000363740 102 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 RNA5SP493-201ENST00000364115 91 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 MIR635-201ENST00000384830 98 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 MIR206-201ENST00000384872 86 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 RNU6-663P-201ENST00000391105 106 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 RNA5SP492-201ENST00000411330 114 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 SNORA31.11-201ENST00000516528 139 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 U6.108-201ENST00000637764 58 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 AL442644.1-201ENST00000454390 3105 ntBASIC2.74□□□□□ -1.97
COL17A1Q9UMD9 RNU5F-1-201ENST00000362507 117 ntBASIC2.73□□□□□ -1.97
COL17A1Q9UMD9 MIR1262-201ENST00000408276 93 ntBASIC2.73□□□□□ -1.97
COL17A1Q9UMD9 SNORD4B-201ENST00000459083 72 ntBASIC2.73□□□□□ -1.97
COL17A1Q9UMD9 AC090821.2-201ENST00000523552 176 ntBASIC2.73□□□□□ -1.97
COL17A1Q9UMD9 MIR4762-201ENST00000585261 75 ntBASIC2.73□□□□□ -1.97
COL17A1Q9UMD9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 Y_RNA.173-201ENST00000363776 113 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 SNORA38-201ENST00000363946 132 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 SNORD115-31-201ENST00000365318 82 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 Y_RNA.596-201ENST00000410462 109 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 MIR3152-201ENST00000579801 74 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 AC005520.4-201ENST00000604337 90 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 AP000553.5-201ENST00000641933 54 ntBASIC2.72□□□□□ -1.97
COL17A1Q9UMD9 RNA5SP37-201ENST00000365420 130 ntBASIC2.71□□□□□ -1.97
COL17A1Q9UMD9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.71□□□□□ -1.97
COL17A1Q9UMD9 RNU7-156P-201ENST00000517214 74 ntBASIC2.71□□□□□ -1.97
COL17A1Q9UMD9 SNORA28-201ENST00000606769 126 ntBASIC2.71□□□□□ -1.97
COL17A1Q9UMD9 AC012676.2-201ENST00000619258 186 ntBASIC2.71□□□□□ -1.97
COL17A1Q9UMD9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.71□□□□□ -1.97
COL17A1Q9UMD9 MIR6841-201ENST00000637129 72 ntBASIC2.71□□□□□ -1.97
COL17A1Q9UMD9 AC245047.3-201ENST00000429428 127 ntBASIC2.71□□□□□ -1.98
COL17A1Q9UMD9 RNA5SP220-201ENST00000516298 104 ntBASIC2.71□□□□□ -1.98
COL17A1Q9UMD9 RNU6-807P-201ENST00000516805 107 ntBASIC2.71□□□□□ -1.98
COL17A1Q9UMD9 AC005786.1-201ENST00000588553 154 ntBASIC2.71□□□□□ -1.98
COL17A1Q9UMD9 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.71□□□□□ -1.98
COL17A1Q9UMD9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
COL17A1Q9UMD9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 U8.5-201ENST00000364528 136 ntBASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 RNA5SP138-201ENST00000365098 114 ntBASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 RNU6-480P-201ENST00000384332 107 ntBASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 RNU6-1241P-201ENST00000384536 107 ntBASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 RNU7-181P-201ENST00000517234 74 ntBASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 MIR4796-201ENST00000580742 81 ntBASIC2.7□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-34-201ENST00000362441 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-12-201ENST00000362583 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-29-201ENST00000362834 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-9-201ENST00000362912 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-21-201ENST00000362963 81 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-3-201ENST00000363100 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-41-201ENST00000363608 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-11-201ENST00000363616 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-5-201ENST00000363633 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-4-201ENST00000363810 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-6-201ENST00000363942 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-42-201ENST00000364273 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-15-201ENST00000364809 81 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-26-201ENST00000365067 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-10-201ENST00000365073 81 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-43-201ENST00000365503 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORD115-36-201ENST00000365629 82 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 Y_RNA.448-201ENST00000384185 108 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 SNORA2B-201ENST00000384583 137 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 MIR633-201ENST00000384821 98 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 MTND5P40-201ENST00000559945 246 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 FAM106DP-201ENST00000586416 501 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 AC069114.2-201ENST00000604699 304 ntBASIC2.69□□□□□ -1.98
COL17A1Q9UMD9 RNU1-58P-201ENST00000362413 163 ntBASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 RNU6-865P-201ENST00000364772 107 ntBASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 RNU6-950P-201ENST00000384651 107 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms