Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 AC027119.1-201ENST00000440877 241 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 snoU13.15-201ENST00000459407 104 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 RNU6-162P-201ENST00000516228 103 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 RNU6-947P-201ENST00000516264 106 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 RN7SKP12-201ENST00000516275 143 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 RNU6-90P-201ENST00000606352 106 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 SNORA25.3-201ENST00000363205 127 ntBASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 RNU6-1163P-201ENST00000364516 107 ntBASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 U8.15-201ENST00000390947 134 ntBASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 RN7SKP223-201ENST00000410582 62 ntBASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 SNRPGP19-201ENST00000603826 189 ntBASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 AC062037.1-201ENST00000605302 128 ntBASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
FOXD3Q9UJU5 MIR21-201ENST00000362134 72 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 RNY1P2-201ENST00000364820 117 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 Y_RNA.388-201ENST00000383919 113 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 RNU6-613P-201ENST00000410412 108 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 snoU13.25-201ENST00000458945 104 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 AC005908.1-201ENST00000468701 347 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 AC026436.1-201ENST00000510537 270 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 MIR4524B-201ENST00000581569 115 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 SNORA4-201ENST00000584302 138 ntBASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
FOXD3Q9UJU5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 Y_RNA.17-201ENST00000362433 111 ntBASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 RNA5SP264-201ENST00000363115 107 ntBASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 MT-TF-201ENST00000387314 71 ntBASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 MIR6740-201ENST00000618268 113 ntBASIC2.1□□□□□ -2.07
FOXD3Q9UJU5 MIR103A2-201ENST00000362154 78 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 RNU6-1244P-201ENST00000363614 108 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 Y_RNA.168-201ENST00000363740 102 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 SNORD58A-201ENST00000383875 65 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 Y_RNA.567-201ENST00000384736 106 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 RNU7-62P-201ENST00000458856 62 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 MIR4769-201ENST00000584126 77 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 RNU6-86P-201ENST00000606534 107 ntBASIC2.09□□□□□ -2.07
FOXD3Q9UJU5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
FOXD3Q9UJU5 HSBP1P2-201ENST00000299671 229 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 Y_RNA.173-201ENST00000363776 113 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 SNORD116-22-201ENST00000384430 92 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 MIR1185-1-201ENST00000408598 86 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 RNU6-1165P-201ENST00000410119 107 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 Y_RNA.593-201ENST00000410292 98 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 SPINT5P-201ENST00000448174 155 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 RPS29P11-201ENST00000496507 171 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 MIR3937-201ENST00000580135 106 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 MIR5007-201ENST00000583098 95 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 MIR6873-201ENST00000622788 63 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 MIR6516-201ENST00000630554 81 ntBASIC2.08□□□□□ -2.08
FOXD3Q9UJU5 MIR30D-201ENST00000362283 70 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 AC019176.1-201ENST00000518519 225 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 MTND5P40-201ENST00000559945 246 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 MIR3664-201ENST00000579074 99 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 AC103810.7-201ENST00000607821 91 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 SEPT14P17-201ENST00000617978 177 ntBASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXD3Q9UJU5 RNU6-1152P-201ENST00000384576 107 ntBASIC2.06□□□□□ -2.08
FOXD3Q9UJU5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXD3Q9UJU5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXD3Q9UJU5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXD3Q9UJU5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.06□□□□□ -2.08
FOXD3Q9UJU5 AC012676.2-201ENST00000619258 186 ntBASIC2.06□□□□□ -2.08
FOXD3Q9UJU5 Y_RNA.190-201ENST00000363964 101 ntBASIC2.05□□□□□ -2.08
FOXD3Q9UJU5 RNU6-675P-201ENST00000384236 104 ntBASIC2.05□□□□□ -2.08
FOXD3Q9UJU5 RNU6-205P-201ENST00000390858 107 ntBASIC2.05□□□□□ -2.08
FOXD3Q9UJU5 AC024614.2-201ENST00000577584 372 ntBASIC2.05□□□□□ -2.08
FOXD3Q9UJU5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
FOXD3Q9UJU5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
FOXD3Q9UJU5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 MIR494-201ENST00000349529 81 ntBASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 RNU6-1125P-201ENST00000363601 107 ntBASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 RNU6-580P-201ENST00000365159 107 ntBASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 RNU6-480P-201ENST00000384332 107 ntBASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
FOXD3Q9UJU5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 AC008834.1-201ENST00000511612 175 ntBASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 AL512310.8-201ENST00000550183 120 ntBASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 AC138749.4-201ENST00000563970 127 ntBASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 MIR4422-201ENST00000581938 83 ntBASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 IGLL4P-201ENST00000614590 133 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 233.2 ms