Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC133104.2-201ENST00000615272 193 ntBASIC-1.47□□□□□ -2.64
COMMD3Q9UBI1 MIR1321-201ENST00000637766 79 ntBASIC-1.47□□□□□ -2.64
COMMD3Q9UBI1 AC024614.3-201ENST00000637860 256 ntBASIC-1.47□□□□□ -2.64
COMMD3Q9UBI1 RNU4-16P-201ENST00000364737 141 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 SNORA51.5-201ENST00000384126 131 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 RNU6-21P-201ENST00000384710 107 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 AC016907.1-201ENST00000419483 435 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 RPS3AP52-201ENST00000435639 297 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 MTND1P34-201ENST00000438556 671 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 RN7SKP19-201ENST00000516016 252 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 PISRT1.1-201ENST00000616930 107 ntBASIC-1.48□□□□□ -2.65
COMMD3Q9UBI1 RNU6-170P-201ENST00000362832 104 ntBASIC-1.49□□□□□ -2.65
COMMD3Q9UBI1 RNA5SP470-201ENST00000516463 106 ntBASIC-1.49□□□□□ -2.65
COMMD3Q9UBI1 RNU7-70P-201ENST00000516941 66 ntBASIC-1.49□□□□□ -2.65
COMMD3Q9UBI1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.49□□□□□ -2.65
COMMD3Q9UBI1 MIR5692C2-201ENST00000577959 77 ntBASIC-1.49□□□□□ -2.65
COMMD3Q9UBI1 MIR4500-201ENST00000579472 76 ntBASIC-1.49□□□□□ -2.65
COMMD3Q9UBI1 MIR4324-201ENST00000584846 72 ntBASIC-1.49□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 SNORA32-201ENST00000384072 121 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 RNA5SP144-201ENST00000410846 116 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 RNU7-113P-201ENST00000459273 62 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 RNU7-169P-201ENST00000459456 61 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 SERF1AP1-201ENST00000514575 187 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 RNA5SP33-201ENST00000516687 98 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 MIR3129-201ENST00000581095 76 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 U4.1-201ENST00000620349 87 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 AC138305.3-201ENST00000624988 240 ntBASIC-1.5□□□□□ -2.65
COMMD3Q9UBI1 RNY3-201ENST00000365484 102 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 RNU6-476P-201ENST00000384726 107 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 MIR548F5-201ENST00000408421 86 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 RNU6-764P-201ENST00000516396 105 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 RNA5SP67-201ENST00000516422 131 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 RNU6-570P-201ENST00000517051 105 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 PART1_1.1-201ENST00000611761 217 ntBASIC-1.51□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 RNY3P11-201ENST00000364153 102 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 RNU6-10P-201ENST00000384036 107 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 AL365205.2-201ENST00000594586 68 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 C8orf59P2-201ENST00000603441 271 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.52□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 AL353813.1-201ENST00000440700 253 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 MTND3P3-201ENST00000505004 126 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 RNA5SP476-201ENST00000516613 103 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 AC007485.1-201ENST00000616755 206 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 MIR8068-201ENST00000618032 68 ntBASIC-1.53□□□□□ -2.65
COMMD3Q9UBI1 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 RNU6-259P-201ENST00000383999 107 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 RNU7-48P-201ENST00000458875 63 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 RNU6-287P-201ENST00000516230 98 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 RNU6-264P-201ENST00000517134 104 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 MIR548AE2-201ENST00000583456 67 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 AC006504.6-201ENST00000590142 199 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 AL669831.3-213ENST00000636676 183 ntBASIC-1.54□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.55□□□□□ -2.66
COMMD3Q9UBI1 RNU6-571P-201ENST00000384128 107 ntBASIC-1.55□□□□□ -2.66
COMMD3Q9UBI1 RNU6-120P-201ENST00000516077 103 ntBASIC-1.55□□□□□ -2.66
COMMD3Q9UBI1 SCARNA15-202ENST00000516881 127 ntBASIC-1.55□□□□□ -2.66
COMMD3Q9UBI1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.55□□□□□ -2.66
COMMD3Q9UBI1 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 RNU6-937P-201ENST00000384325 106 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 RNU6-905P-201ENST00000384434 107 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 MTND1P1-201ENST00000445453 368 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 AC107399.1-201ENST00000451226 265 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 RNU7-106P-201ENST00000459514 67 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 SNORD113-5-201ENST00000607261 78 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 AP001362.1-201ENST00000625165 124 ntBASIC-1.56□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.57□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.57□□□□□ -2.66
COMMD3Q9UBI1 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.57□□□□□ -2.66
COMMD3Q9UBI1 RNY1P6-201ENST00000384193 109 ntBASIC-1.57□□□□□ -2.66
COMMD3Q9UBI1 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.57□□□□□ -2.66
COMMD3Q9UBI1 DEFB108C-201ENST00000400154 252 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms