Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 TUG1_4.1-201ENST00000619464 181 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 RNU6-369P-201ENST00000362515 102 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 SNORD115-2-201ENST00000362842 82 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 SNORD115-20-201ENST00000365099 82 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 ACA64.5-201ENST00000516207 127 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 AC141846.1-201ENST00000568348 142 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 AL359821.1-201ENST00000605519 182 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 AC020891.4-201ENST00000605745 93 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
DDX56Q9NY93 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
DDX56Q9NY93 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
DDX56Q9NY93 MIR337-201ENST00000362281 93 ntBASIC1.1□□□□□ -2.23
DDX56Q9NY93 SNORA32-201ENST00000384072 121 ntBASIC1.1□□□□□ -2.23
DDX56Q9NY93 AL158147.1-201ENST00000443970 75 ntBASIC1.1□□□□□ -2.23
DDX56Q9NY93 RN7SKP19-201ENST00000516016 252 ntBASIC1.1□□□□□ -2.23
DDX56Q9NY93 RNY4P20-201ENST00000516678 93 ntBASIC1.1□□□□□ -2.23
DDX56Q9NY93 AL353765.1-201ENST00000605514 183 ntBASIC1.1□□□□□ -2.23
DDX56Q9NY93 AC023934.1-201ENST00000574529 2389 ntBASIC1.1□□□□□ -2.23
DDX56Q9NY93 RNY1P10-201ENST00000363268 113 ntBASIC1.09□□□□□ -2.23
DDX56Q9NY93 RNU6-647P-201ENST00000364243 107 ntBASIC1.09□□□□□ -2.23
DDX56Q9NY93 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
DDX56Q9NY93 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
DDX56Q9NY93 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
DDX56Q9NY93 MIR548M-201ENST00000408260 86 ntBASIC1.09□□□□□ -2.23
DDX56Q9NY93 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.09□□□□□ -2.23
DDX56Q9NY93 MIR548AE2-201ENST00000583456 67 ntBASIC1.09□□□□□ -2.23
DDX56Q9NY93 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
DDX56Q9NY93 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
DDX56Q9NY93 Y_RNA.280-201ENST00000364765 112 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 Y_RNA.327-201ENST00000365201 102 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 RNU6-1335P-201ENST00000365426 107 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 MIR1257-201ENST00000408490 117 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 RNU7-185P-201ENST00000459215 60 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 RNU7-79P-201ENST00000516082 62 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 AC022523.2-201ENST00000561045 150 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 MIR4676-201ENST00000583078 72 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.08□□□□□ -2.24
DDX56Q9NY93 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
DDX56Q9NY93 RNU6-235P-201ENST00000362644 107 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 RNU6-392P-201ENST00000364926 101 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 RNY1P13-201ENST00000365030 105 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 RNU6-1104P-201ENST00000384723 104 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 MIR520F-201ENST00000384824 87 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 Y_RNA.586-201ENST00000391146 98 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 SNORD99-201ENST00000408612 74 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 RNU6-1086P-201ENST00000410930 100 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 RNU6-1211P-201ENST00000459179 105 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 SNORA4-201ENST00000584302 138 ntBASIC1.07□□□□□ -2.24
DDX56Q9NY93 MIR613-201ENST00000385248 95 ntBASIC1.06□□□□□ -2.24
DDX56Q9NY93 MIR938-201ENST00000401216 83 ntBASIC1.06□□□□□ -2.24
DDX56Q9NY93 MIR1263-201ENST00000408324 86 ntBASIC1.06□□□□□ -2.24
DDX56Q9NY93 RNU7-35P-201ENST00000517174 62 ntBASIC1.06□□□□□ -2.24
DDX56Q9NY93 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
DDX56Q9NY93 AL589743.1-201ENST00000551932 2712 ntBASIC1.06□□□□□ -2.24
DDX56Q9NY93 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
DDX56Q9NY93 U8.15-201ENST00000390947 134 ntBASIC1.05□□□□□ -2.24
DDX56Q9NY93 SNORD93-201ENST00000408813 74 ntBASIC1.05□□□□□ -2.24
DDX56Q9NY93 Y_RNA.617-201ENST00000410920 90 ntBASIC1.05□□□□□ -2.24
DDX56Q9NY93 RNU6-781P-201ENST00000516377 101 ntBASIC1.05□□□□□ -2.24
DDX56Q9NY93 RNU6-971P-201ENST00000516920 106 ntBASIC1.05□□□□□ -2.24
DDX56Q9NY93 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.05□□□□□ -2.24
DDX56Q9NY93 RMST_2.1-201ENST00000617263 136 ntBASIC1.05□□□□□ -2.24
DDX56Q9NY93 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
DDX56Q9NY93 RNU6-704P-201ENST00000364162 103 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 SNORD50.2-201ENST00000365465 70 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
DDX56Q9NY93 RNU6-949P-201ENST00000384040 107 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 RNU6-364P-201ENST00000384387 107 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 RNU6-110P-201ENST00000384508 104 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 SUMO1P3-201ENST00000439961 304 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 PSMC1P5-201ENST00000512850 177 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 MIR4804-201ENST00000581683 73 ntBASIC1.04□□□□□ -2.24
DDX56Q9NY93 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
DDX56Q9NY93 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 MIR125B2-201ENST00000385128 89 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU1-119P-201ENST00000391122 165 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-447P-201ENST00000410293 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-1118P-201ENST00000410382 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-1076P-201ENST00000410397 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-355P-201ENST00000410427 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-791P-201ENST00000410467 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-705P-201ENST00000410601 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU4-69P-201ENST00000410677 143 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-1100P-201ENST00000410691 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-860P-201ENST00000410860 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-1217P-201ENST00000411276 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU6-785P-201ENST00000411324 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 RNU7-56P-201ENST00000458744 62 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 MIR1270-201ENST00000459320 83 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 U6.90-201ENST00000614007 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 U6.70-201ENST00000620287 104 ntBASIC1.03□□□□□ -2.24
DDX56Q9NY93 Y_RNA.299-201ENST00000364973 94 ntBASIC1.02□□□□□ -2.25
DDX56Q9NY93 MIR539-201ENST00000365690 78 ntBASIC1.02□□□□□ -2.25
DDX56Q9NY93 MIR520H-201ENST00000385126 88 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms