Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 Y_RNA.78-201ENST00000362970 110 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 SNORA25.3-201ENST00000363205 127 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 Y_RNA.191-201ENST00000363972 113 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 RNU6-392P-201ENST00000364926 101 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 RNU6-1113P-201ENST00000384348 107 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 RNU6-537P-201ENST00000517277 103 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
CLDND1Q9NY35 AP003716.2-201ENST00000528260 108 ntBASIC1.8□□□□□ -2.12
CLDND1Q9NY35 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CLDND1Q9NY35 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLDND1Q9NY35 RNU6-1298P-201ENST00000362456 101 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 RNU6-1065P-201ENST00000384513 106 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 SNORA19.1-201ENST00000410656 129 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 AC244023.1-201ENST00000426884 112 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 RPL30P7-201ENST00000479312 323 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 AL133373.1-201ENST00000497098 94 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 MIR3664-201ENST00000579074 99 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 MIR3937-201ENST00000580135 106 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 AC242498.1-201ENST00000604134 111 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 FAM71BP1-201ENST00000604431 523 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 AL645939.4-201ENST00000604495 135 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.79□□□□□ -2.12
CLDND1Q9NY35 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLDND1Q9NY35 Y_RNA.155-201ENST00000363632 101 ntBASIC1.78□□□□□ -2.12
CLDND1Q9NY35 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
CLDND1Q9NY35 RNU6-409P-201ENST00000384114 104 ntBASIC1.78□□□□□ -2.12
CLDND1Q9NY35 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.78□□□□□ -2.12
CLDND1Q9NY35 RNU6-733P-201ENST00000410759 104 ntBASIC1.78□□□□□ -2.12
CLDND1Q9NY35 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDND1Q9NY35 AL353813.1-201ENST00000440700 253 ntBASIC1.78□□□□□ -2.12
CLDND1Q9NY35 RNA5SP480-201ENST00000516840 109 ntBASIC1.78□□□□□ -2.12
CLDND1Q9NY35 MIR6734-201ENST00000621166 68 ntBASIC1.78□□□□□ -2.12
CLDND1Q9NY35 RNU4-52P-201ENST00000384209 138 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 MIR590-201ENST00000385008 97 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 RNU6-1086P-201ENST00000410930 100 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 RNU6-904P-201ENST00000516206 101 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 RNA5SP220-201ENST00000516298 104 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 AC141557.1-201ENST00000540982 400 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 MIR4452-201ENST00000583004 71 ntBASIC1.77□□□□□ -2.13
CLDND1Q9NY35 RNU6-396P-201ENST00000365369 105 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 Y_RNA.360-201ENST00000365512 102 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 MIR605-201ENST00000385078 83 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 RNU6-679P-201ENST00000391003 106 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 SNORA7.5-201ENST00000410672 110 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 RNU7-79P-201ENST00000516082 62 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 Y_RNA.677-201ENST00000516401 85 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 RNU6-521P-201ENST00000516663 105 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 MIR4694-201ENST00000578534 80 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 AP001318.4-201ENST00000616637 121 ntBASIC1.76□□□□□ -2.13
CLDND1Q9NY35 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLDND1Q9NY35 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
CLDND1Q9NY35 RNU6-1099P-201ENST00000363533 107 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 RNU6-60P-201ENST00000364792 103 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 Y_RNA.348-201ENST00000365403 103 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 RNU6-1237P-201ENST00000384777 107 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 RNU1-78P-201ENST00000391248 165 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 MIR1185-1-201ENST00000408598 86 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 RNU1-92P-201ENST00000517017 135 ntBASIC1.75□□□□□ -2.13
CLDND1Q9NY35 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLDND1Q9NY35 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDND1Q9NY35 RNY3P2-201ENST00000362918 102 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 RNA5SP264-201ENST00000363115 107 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 SNORD115-35-201ENST00000365122 82 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 Y_RNA.540-201ENST00000384638 111 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 Y_RNA.544-201ENST00000384650 113 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 MIR206-201ENST00000384872 86 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 MIR577-201ENST00000385196 96 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 RPS27P16-201ENST00000425758 201 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 snoU13.2-201ENST00000459201 104 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 RNU7-2P-201ENST00000516096 62 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 SNORD67.1-201ENST00000516618 108 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 MIR2115-201ENST00000516657 100 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 RNU11-2P-201ENST00000516898 142 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 DEFB131E-201ENST00000532329 154 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.74□□□□□ -2.13
CLDND1Q9NY35 AL157834.3-201ENST00000615543 103 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 Y_RNA.818-201ENST00000618813 71 ntBASIC1.74□□□□□ -2.13
CLDND1Q9NY35 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
CLDND1Q9NY35 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDND1Q9NY35 MIR103A2-201ENST00000362154 78 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 MT-TN-201ENST00000387400 73 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CLDND1Q9NY35 HMGN2P38-201ENST00000423806 265 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 RNU6-109P-201ENST00000516364 107 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 RNU6-184P-201ENST00000516514 107 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 RNU6-1018P-201ENST00000516577 106 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 RNA5SP170-201ENST00000517150 101 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 AC141846.1-201ENST00000568348 142 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms