Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 SNORD3E-202ENST00000627253 216 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 MIR181B2-201ENST00000385004 89 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 MIR519C-201ENST00000385053 87 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 MIR1283-2-201ENST00000408621 87 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 SPINT5P-201ENST00000448174 155 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 RNU7-79P-201ENST00000516082 62 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 RNU7-153P-201ENST00000516455 62 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 RNA5SP137-201ENST00000516833 135 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 AC026271.5-201ENST00000577873 130 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 RNU6-90P-201ENST00000606352 106 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 AC145423.2-201ENST00000610631 239 ntBASIC1.98□□□□□ -2.09
SMPD4Q9NXE4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 RNU6-865P-201ENST00000364772 107 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 RNU6-602P-201ENST00000411155 105 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 AC087499.7-201ENST00000441958 109 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 FAM106DP-201ENST00000586416 501 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 AC012676.2-201ENST00000619258 186 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 Z97988.1-201ENST00000637697 135 ntBASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SMPD4Q9NXE4 RNU6-478P-201ENST00000363904 110 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 SNORA2B-201ENST00000384583 137 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 MIR660-201ENST00000385235 97 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 snoU13.16-201ENST00000459350 104 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 AC004223.1-201ENST00000479840 271 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 MIR4529-201ENST00000578110 78 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMPD4Q9NXE4 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 MIR29C-201ENST00000385231 88 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 RNU6-482P-201ENST00000391068 107 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 HMGN2P39-201ENST00000398005 273 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 RPL23AP6-201ENST00000446637 472 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 AL513423.1-201ENST00000621695 132 ntBASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.95□□□□□ -2.1
SMPD4Q9NXE4 RNA5SP133-201ENST00000363368 119 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 SNORD114-10-201ENST00000363409 72 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 RNU6-296P-201ENST00000384608 107 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 RNU6-950P-201ENST00000384651 107 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 RNU11-3P-201ENST00000391111 133 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 RNU7-48P-201ENST00000458875 63 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 RNU6-523P-201ENST00000516304 54 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 MIR8081-201ENST00000611533 95 ntBASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMPD4Q9NXE4 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
SMPD4Q9NXE4 RNY1P13-201ENST00000365030 105 ntBASIC1.93□□□□□ -2.1
SMPD4Q9NXE4 SNORA74.3-201ENST00000517108 154 ntBASIC1.93□□□□□ -2.1
SMPD4Q9NXE4 AP006437.1-201ENST00000641440 3685 ntBASIC1.93□□□□□ -2.1
SMPD4Q9NXE4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.93□□□□□ -2.1
SMPD4Q9NXE4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SMPD4Q9NXE4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 AL450471.1-201ENST00000447509 127 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 RPS29P11-201ENST00000496507 171 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 MTND5P40-201ENST00000559945 246 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 MIR548AO-201ENST00000579992 96 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
SMPD4Q9NXE4 RNU6-315P-201ENST00000362666 107 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 RNU6-112P-201ENST00000363599 104 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 MIR520A-201ENST00000384862 85 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 RNA5SP445-201ENST00000515889 115 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 RNU6-917P-201ENST00000516294 104 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 SNORA25.13-201ENST00000516395 103 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 MIR4709-201ENST00000577272 72 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 AP001362.1-201ENST00000625165 124 ntBASIC1.91□□□□□ -2.1
SMPD4Q9NXE4 HSBP1P2-201ENST00000299671 229 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 SNORD115-37-201ENST00000363768 82 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 SNORA48.1-201ENST00000390879 135 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 RNU6-129P-201ENST00000391022 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 531 ms