Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MIR1-1-201ENST00000362147 71 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 SNORD116-14-201ENST00000383894 92 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 SNORD116-17-201ENST00000383929 92 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 SNORD116-15-201ENST00000384445 92 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 SNORD116-19-201ENST00000384729 92 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 AC108667.1-201ENST00000428618 249 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 MIR1270-201ENST00000459320 83 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 RNU6-237P-201ENST00000515985 71 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 RNU6-659P-201ENST00000516454 104 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 Y_RNA.712-201ENST00000517011 92 ntBASIC1.21□□□□□ -2.22
MKS1Q9NXB0 AC023934.1-201ENST00000574529 2389 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 AL157777.2-201ENST00000258070 137 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 Y_RNA.525-201ENST00000384570 113 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 MIR100-201ENST00000385259 80 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 MT-TI-201ENST00000387365 69 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 RNU4-62P-201ENST00000410125 130 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 RNU4-61P-201ENST00000411243 107 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 Y_RNA.630-201ENST00000411370 108 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 AC015818.7-201ENST00000428754 109 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 AC087499.7-201ENST00000441958 109 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 RPL39P25-201ENST00000449384 154 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 RNU7-185P-201ENST00000459215 60 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 U7.7-201ENST00000459276 60 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 AC020891.4-201ENST00000605745 93 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 AL391516.1-201ENST00000554380 2449 ntBASIC1.2□□□□□ -2.22
MKS1Q9NXB0 Y_RNA.127-201ENST00000363386 109 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 Y_RNA.346-201ENST00000365385 112 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 MIR759-201ENST00000390224 91 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 U8.15-201ENST00000390947 134 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 SNORD89-201ENST00000390981 114 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 RNA5SP458-201ENST00000516188 119 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 MTND5P18-201ENST00000445624 1801 ntBASIC1.19□□□□□ -2.22
MKS1Q9NXB0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MKS1Q9NXB0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MKS1Q9NXB0 SNORD77B-201ENST00000391112 67 ntBASIC1.18□□□□□ -2.22
MKS1Q9NXB0 MIR1257-201ENST00000408490 117 ntBASIC1.18□□□□□ -2.22
MKS1Q9NXB0 RNU6-789P-201ENST00000517105 102 ntBASIC1.18□□□□□ -2.22
MKS1Q9NXB0 MIR3163-201ENST00000581592 73 ntBASIC1.18□□□□□ -2.22
MKS1Q9NXB0 MIR4676-201ENST00000583078 72 ntBASIC1.18□□□□□ -2.22
MKS1Q9NXB0 MIR378A-201ENST00000362177 66 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 RNU7-95P-201ENST00000459222 64 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 PDCD5P2-201ENST00000507570 312 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 RNU6-977P-201ENST00000516411 103 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 RNU7-6P-201ENST00000516845 62 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 MIR3124-201ENST00000582636 67 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 MIR3914-2-201ENST00000637339 95 ntBASIC1.17□□□□□ -2.22
MKS1Q9NXB0 RNU1-36P-201ENST00000365130 165 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 MIR125B2-201ENST00000385128 89 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 SNORD93-201ENST00000408813 74 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 AC008267.6-201ENST00000441664 139 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.16□□□□□ -2.22
MKS1Q9NXB0 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 RNU6-1333P-201ENST00000516162 93 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 SNORD67.1-201ENST00000516618 108 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 MIR4804-201ENST00000581683 73 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.16□□□□□ -2.22
MKS1Q9NXB0 AC087741.2-201ENST00000619415 172 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 AL589743.1-201ENST00000551932 2712 ntBASIC1.16□□□□□ -2.22
MKS1Q9NXB0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
MKS1Q9NXB0 RNU6-1117P-201ENST00000384525 104 ntBASIC1.15□□□□□ -2.23
MKS1Q9NXB0 RNU6-735P-201ENST00000410612 107 ntBASIC1.15□□□□□ -2.23
MKS1Q9NXB0 AC096949.1-201ENST00000412047 152 ntBASIC1.15□□□□□ -2.23
MKS1Q9NXB0 RNU7-137P-201ENST00000516788 62 ntBASIC1.15□□□□□ -2.23
MKS1Q9NXB0 AL359881.1-201ENST00000602916 267 ntBASIC1.15□□□□□ -2.23
MKS1Q9NXB0 FAM71BP1-201ENST00000604431 523 ntBASIC1.15□□□□□ -2.23
MKS1Q9NXB0 SNORD114-10-201ENST00000363409 72 ntBASIC1.14□□□□□ -2.23
MKS1Q9NXB0 SNORD113-1-201ENST00000365321 69 ntBASIC1.14□□□□□ -2.23
MKS1Q9NXB0 AP1B1P2-201ENST00000416196 106 ntBASIC1.14□□□□□ -2.23
MKS1Q9NXB0 BTF3P4-201ENST00000418852 495 ntBASIC1.14□□□□□ -2.23
MKS1Q9NXB0 RNU6-406P-201ENST00000516470 107 ntBASIC1.14□□□□□ -2.23
MKS1Q9NXB0 MIR4661-201ENST00000582720 75 ntBASIC1.14□□□□□ -2.23
MKS1Q9NXB0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
MKS1Q9NXB0 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
MKS1Q9NXB0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.13□□□□□ -2.23
MKS1Q9NXB0 MIR938-201ENST00000401216 83 ntBASIC1.13□□□□□ -2.23
MKS1Q9NXB0 AL365222.1-201ENST00000614661 98 ntBASIC1.13□□□□□ -2.23
MKS1Q9NXB0 RMST_2.1-201ENST00000617263 136 ntBASIC1.13□□□□□ -2.23
MKS1Q9NXB0 U6.95-201ENST00000636931 70 ntBASIC1.13□□□□□ -2.23
MKS1Q9NXB0 SNORD115-19-201ENST00000363098 82 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 SNORD115-18-201ENST00000363293 82 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 RNY4P6-201ENST00000363667 96 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 SNORD115-17-201ENST00000364612 82 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 Y_RNA.261-201ENST00000364631 102 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
MKS1Q9NXB0 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 RNU6-616P-201ENST00000384353 107 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 SNORA22C-201ENST00000384614 134 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 MIR520F-201ENST00000384824 87 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 SNORD105-201ENST00000386910 85 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms