Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 RNU4-83P-201ENST00000410863 133 ntBASIC0.37□□□□□ -2.35
GDF3Q9NR23 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
GDF3Q9NR23 Y_RNA.680-201ENST00000516441 93 ntBASIC0.37□□□□□ -2.35
GDF3Q9NR23 AC141846.1-201ENST00000568348 142 ntBASIC0.37□□□□□ -2.35
GDF3Q9NR23 MIR3128-201ENST00000581957 66 ntBASIC0.37□□□□□ -2.35
GDF3Q9NR23 AC062037.2-201ENST00000610137 73 ntBASIC0.37□□□□□ -2.35
GDF3Q9NR23 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
GDF3Q9NR23 Y_RNA.162-201ENST00000363683 102 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 RNA5SP117-201ENST00000365294 118 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 Y_RNA.374-201ENST00000365606 101 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 RNU4-70P-201ENST00000384579 139 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 RNU6-1045P-201ENST00000516321 107 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 SNORA62.5-201ENST00000516634 120 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 MRPS18CP4-201ENST00000535821 231 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 MIR3678-201ENST00000578455 94 ntBASIC0.36□□□□□ -2.35
GDF3Q9NR23 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
GDF3Q9NR23 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
GDF3Q9NR23 RNU6-275P-201ENST00000364910 107 ntBASIC0.35□□□□□ -2.35
GDF3Q9NR23 RPL39P25-201ENST00000449384 154 ntBASIC0.35□□□□□ -2.35
GDF3Q9NR23 RNU4-71P-201ENST00000516258 113 ntBASIC0.35□□□□□ -2.35
GDF3Q9NR23 RNA5SP94-201ENST00000516917 108 ntBASIC0.35□□□□□ -2.35
GDF3Q9NR23 Y_RNA.75-201ENST00000362927 97 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 SNORA25.7-201ENST00000364375 127 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 Y_RNA.412-201ENST00000384001 104 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 Y_RNA.588-201ENST00000391254 102 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 AC096949.1-201ENST00000412047 152 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 AL118496.2-201ENST00000448300 230 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 RNU6-1023P-201ENST00000516137 106 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 U6.106-201ENST00000636360 105 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 MTND5P32-201ENST00000560711 1802 ntBASIC0.34□□□□□ -2.36
GDF3Q9NR23 Y_RNA.13-201ENST00000362403 112 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 RNU4-16P-201ENST00000364737 141 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 RNU6-949P-201ENST00000384040 107 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 SNORA18-201ENST00000384416 132 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 Y_RNA.617-201ENST00000410920 90 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 SNORA25.12-201ENST00000516202 82 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 RNU6-1258P-201ENST00000516911 111 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 RNU6-111P-201ENST00000517179 105 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 Y_RNA.757-201ENST00000578934 114 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 U4.1-201ENST00000620349 87 ntBASIC0.33□□□□□ -2.36
GDF3Q9NR23 Y_RNA.60-201ENST00000362831 98 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 RNU6-403P-201ENST00000363163 104 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 RNU6-1336P-201ENST00000383886 109 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 RNU6-918P-201ENST00000391219 106 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 RNU6-893P-201ENST00000458841 100 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.32□□□□□ -2.36
GDF3Q9NR23 AP003327.1-201ENST00000529684 127 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 MIR4491-201ENST00000581087 68 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 MIR6082-201ENST00000613604 109 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.32□□□□□ -2.36
GDF3Q9NR23 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
GDF3Q9NR23 RNY1P13-201ENST00000365030 105 ntBASIC0.31□□□□□ -2.36
GDF3Q9NR23 Y_RNA.447-201ENST00000384184 113 ntBASIC0.31□□□□□ -2.36
GDF3Q9NR23 Y_RNA.515-201ENST00000384535 112 ntBASIC0.31□□□□□ -2.36
GDF3Q9NR23 RNU5E-9P-201ENST00000411164 104 ntBASIC0.31□□□□□ -2.36
GDF3Q9NR23 AC133485.4-201ENST00000561835 220 ntBASIC0.31□□□□□ -2.36
GDF3Q9NR23 MIR4503-201ENST00000582187 83 ntBASIC0.31□□□□□ -2.36
GDF3Q9NR23 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 Y_RNA.171-201ENST00000363760 102 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 Y_RNA.251-201ENST00000364551 99 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 SNORA20.1-201ENST00000364790 130 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 RNY1P6-201ENST00000384193 109 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 RNU6-1086P-201ENST00000410930 100 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 MTND3P2-201ENST00000438452 342 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 RNU6-765P-201ENST00000516916 99 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 MIR4431-201ENST00000579990 94 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 uc_338.16-201ENST00000621804 95 ntBASIC0.3□□□□□ -2.36
GDF3Q9NR23 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 RNU6-349P-201ENST00000362402 107 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 RNA5SP257-201ENST00000363023 116 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 Y_RNA.435-201ENST00000384095 112 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 SNORA8.2-201ENST00000384372 139 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 Y_RNA.521-201ENST00000384560 114 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 MIR644A-201ENST00000385262 94 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 SNORA25.18-201ENST00000607153 114 ntBASIC0.29□□□□□ -2.36
GDF3Q9NR23 Y_RNA.52-201ENST00000362760 96 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 SNORA36.1-201ENST00000363424 132 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 Y_RNA.193-201ENST00000363979 102 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 RNU6-702P-201ENST00000364982 107 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 Y_RNA.307-201ENST00000365022 117 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 Y_RNA.567-201ENST00000384736 106 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 RNA5SP144-201ENST00000410846 116 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 RNA5SP236-201ENST00000516169 116 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
GDF3Q9NR23 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.28□□□□□ -2.36
GDF3Q9NR23 MIR411-201ENST00000362239 96 ntBASIC0.27□□□□□ -2.37
GDF3Q9NR23 Y_RNA.200-201ENST00000364018 102 ntBASIC0.27□□□□□ -2.37
GDF3Q9NR23 RNU6-1082P-201ENST00000364574 107 ntBASIC0.27□□□□□ -2.37
GDF3Q9NR23 RNU6-47P-201ENST00000383866 107 ntBASIC0.27□□□□□ -2.37
GDF3Q9NR23 RNU6-768P-201ENST00000384683 107 ntBASIC0.27□□□□□ -2.37
GDF3Q9NR23 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
GDF3Q9NR23 RNU6-863P-201ENST00000515989 104 ntBASIC0.27□□□□□ -2.37
GDF3Q9NR23 RNU7-79P-201ENST00000516082 62 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms