Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AP001328.1-201ENST00000528550 176 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 AC141846.1-201ENST00000568348 142 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 MIR3121-201ENST00000579680 77 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 MIR4676-201ENST00000583078 72 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 SNORA4-201ENST00000584302 138 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HINT3Q9NQE9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
HINT3Q9NQE9 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
HINT3Q9NQE9 SNORD105-201ENST00000386910 85 ntBASIC0.83□□□□□ -2.28
HINT3Q9NQE9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.83□□□□□ -2.28
HINT3Q9NQE9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.83□□□□□ -2.28
HINT3Q9NQE9 RNU7-164P-201ENST00000459221 62 ntBASIC0.83□□□□□ -2.28
HINT3Q9NQE9 MIR4804-201ENST00000581683 73 ntBASIC0.83□□□□□ -2.28
HINT3Q9NQE9 AC108081.1-201ENST00000604358 221 ntBASIC0.83□□□□□ -2.28
HINT3Q9NQE9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.83□□□□□ -2.28
HINT3Q9NQE9 MIR96-201ENST00000362288 78 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.506-201ENST00000384494 102 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.531-201ENST00000384589 121 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 MIR520F-201ENST00000384824 87 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 MIR1257-201ENST00000408490 117 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 RNA5SP272-201ENST00000516095 111 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 RNU6-426P-201ENST00000516464 97 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 RNA5SP33-201ENST00000516687 98 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 AL137067.1-201ENST00000615933 120 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 RMST_2.1-201ENST00000617263 136 ntBASIC0.82□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.226-201ENST00000364337 114 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 RNY1P5-201ENST00000383890 115 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 MIR125B2-201ENST00000385128 89 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 SNORD99-201ENST00000408612 74 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 RNA5SP247-201ENST00000411181 105 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 RPL39P25-201ENST00000449384 154 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 RNU7-123P-201ENST00000515911 60 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 MIR4452-201ENST00000583004 71 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.114-201ENST00000363265 113 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.298-201ENST00000364960 107 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 U8.15-201ENST00000390947 134 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 MIR938-201ENST00000401216 83 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 MIR1287-201ENST00000408492 90 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 RNU6-346P-201ENST00000516288 111 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 RNU7-35P-201ENST00000517174 62 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
HINT3Q9NQE9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
HINT3Q9NQE9 RNY1P13-201ENST00000365030 105 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.343-201ENST00000365354 112 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HINT3Q9NQE9 RNU6-949P-201ENST00000384040 107 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 MIR520H-201ENST00000385126 88 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 SNORD93-201ENST00000408813 74 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 RNU7-56P-201ENST00000458744 62 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 RNU7-79P-201ENST00000516082 62 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 MIR548AE2-201ENST00000583456 67 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 U7.2-201ENST00000607576 63 ntBASIC0.79□□□□□ -2.28
HINT3Q9NQE9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.78□□□□□ -2.28
HINT3Q9NQE9 SNORA32-201ENST00000384072 121 ntBASIC0.78□□□□□ -2.28
HINT3Q9NQE9 RNU7-156P-201ENST00000517214 74 ntBASIC0.78□□□□□ -2.28
HINT3Q9NQE9 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.78□□□□□ -2.28
HINT3Q9NQE9 MIR6767-201ENST00000637302 66 ntBASIC0.78□□□□□ -2.28
HINT3Q9NQE9 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HINT3Q9NQE9 RNU6-364P-201ENST00000384387 107 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.568-201ENST00000384742 113 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 RNU1-119P-201ENST00000391122 165 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 RNY4P20-201ENST00000516678 93 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 AL589743.1-201ENST00000551932 2712 ntBASIC0.77□□□□□ -2.29
HINT3Q9NQE9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HINT3Q9NQE9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-647P-201ENST00000364243 107 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-1062P-201ENST00000383908 107 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-447P-201ENST00000410293 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-355P-201ENST00000410427 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-791P-201ENST00000410467 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-705P-201ENST00000410601 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-860P-201ENST00000410860 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU4-83P-201ENST00000410863 133 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 RNU6-785P-201ENST00000411324 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 AC096949.1-201ENST00000412047 152 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 IGKV1-22-201ENST00000524313 326 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 AC011195.1-201ENST00000578177 177 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 SNORD92-201ENST00000585078 85 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms