Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-755P-201ENST00000364400 103 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-153P-201ENST00000364422 104 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 SNORA18-201ENST00000384416 132 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 AC244023.1-201ENST00000426884 112 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 SNORA70.22-201ENST00000517160 124 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 AC242498.1-201ENST00000604134 111 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 uc_338.28-201ENST00000612082 187 ntBASIC1.3□□□□□ -2.2
SEMA4BQ9NPR2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 MIR1185-1-201ENST00000408598 86 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 AP003716.2-201ENST00000528260 108 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 MIR1255B1-201ENST00000636325 63 ntBASIC1.29□□□□□ -2.2
SEMA4BQ9NPR2 MIR103A2-201ENST00000362154 78 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 RNA5SP327-201ENST00000362494 101 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.49-201ENST00000362714 112 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 RNA5SP264-201ENST00000363115 107 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 SNORA7.1-201ENST00000363750 139 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-396P-201ENST00000365369 105 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-616P-201ENST00000384353 107 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 RPL39P34-201ENST00000477141 156 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 AC048334.1-201ENST00000477975 159 ntBASIC1.28□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 SNORD115-19-201ENST00000363098 82 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 SNORD115-18-201ENST00000363293 82 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 SNORD115-17-201ENST00000364612 82 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 U8.6-201ENST00000364939 135 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-1014P-201ENST00000383940 103 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-106P-201ENST00000384405 107 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 SNORD77B-201ENST00000391112 67 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-321P-201ENST00000410912 106 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 AC068339.1-201ENST00000526965 141 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 MIR6516-201ENST00000630554 81 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 AL162726.3-218ENST00000636401 95 ntBASIC1.27□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-654P-201ENST00000364373 107 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-205P-201ENST00000390858 107 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-816P-201ENST00000390914 107 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-554P-201ENST00000410466 106 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 RNU7-35P-201ENST00000517174 62 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 MIR5009-201ENST00000578736 100 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 AL359821.1-201ENST00000605519 182 ntBASIC1.26□□□□□ -2.21
SEMA4BQ9NPR2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 MIR450A1-201ENST00000362262 91 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 Y_RNA.163-201ENST00000363702 113 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 Y_RNA.323-201ENST00000365157 109 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-147P-201ENST00000383983 107 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 RNA5SP95-201ENST00000410319 137 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 RPL39P25-201ENST00000449384 154 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 MIR2115-201ENST00000516657 100 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-94P-201ENST00000607728 107 ntBASIC1.25□□□□□ -2.21
SEMA4BQ9NPR2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 MIR588-201ENST00000384900 83 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 MIR1912-201ENST00000410389 80 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 RNA5SP237-201ENST00000410414 113 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 snoU13.2-201ENST00000459201 104 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 RNU7-79P-201ENST00000516082 62 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 MIR4264-201ENST00000583520 66 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 MIR4781-201ENST00000585250 76 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 FAM71BP1-201ENST00000604431 523 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 AL157834.3-201ENST00000615543 103 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 MIR6740-201ENST00000618268 113 ntBASIC1.24□□□□□ -2.21
SEMA4BQ9NPR2 RNU6-363P-201ENST00000362895 105 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 Y_RNA.155-201ENST00000363632 101 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 RNU4-67P-201ENST00000364569 141 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 Y_RNA.507-201ENST00000384500 99 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 SNORA7.5-201ENST00000410672 110 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 AL031737.1-201ENST00000450125 223 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 SNORD67.1-201ENST00000516618 108 ntBASIC1.23□□□□□ -2.21
SEMA4BQ9NPR2 RNU11-2P-201ENST00000516898 142 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms