Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SNORD116-25-201ENST00000516517 92 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 MIR1273G-201ENST00000577677 100 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 AC023932.2-201ENST00000603176 175 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.352-201ENST00000365439 102 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.423-201ENST00000384057 113 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.470-201ENST00000384307 117 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 PCNPP3-201ENST00000393579 471 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 RNA5SP127-201ENST00000411051 133 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.697-201ENST00000516776 113 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 RNU6-765P-201ENST00000516916 99 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 RNA5SP47-201ENST00000517230 109 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
HMG20AQ9NP66 RNU4-67P-201ENST00000364569 141 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 SNORD28-201ENST00000384706 75 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 RNU6-1086P-201ENST00000410930 100 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 RNU7-79P-201ENST00000516082 62 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 RNA5SP227-201ENST00000516184 113 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 RNU6-531P-201ENST00000516694 104 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 MIR4752-201ENST00000579672 72 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 MIR4308-201ENST00000580634 81 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 MIR6828-201ENST00000636181 60 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
HMG20AQ9NP66 SNORA63.5-201ENST00000363548 123 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.326-201ENST00000365176 113 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 RNY4P28-201ENST00000365281 93 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 RNU6-1160P-201ENST00000384546 104 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 MIR624-201ENST00000385217 97 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.04□□□□□ -2.4
HMG20AQ9NP66 SNORD127-201ENST00000458892 86 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.797-201ENST00000515977 94 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 MRPS18CP4-201ENST00000535821 231 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 U6.104-201ENST00000637979 90 ntBASIC0.04□□□□□ -2.4
HMG20AQ9NP66 MIR330-201ENST00000362196 94 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.47-201ENST00000362697 108 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.174-201ENST00000363781 105 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 SNORD27-201ENST00000363981 72 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 SNORA32-201ENST00000384072 121 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 RNA5SP144-201ENST00000410846 116 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 RNU5E-9P-201ENST00000411164 104 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 MTND2P23-201ENST00000422990 651 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 RNU6-1194P-201ENST00000516208 104 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 RNU6-1232P-201ENST00000516299 86 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 AC008737.2-201ENST00000599446 118 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 TUG1_4.1-201ENST00000619464 181 ntBASIC0.03□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.65-201ENST00000362846 100 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 RNA5SP133-201ENST00000363368 119 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.182-201ENST00000363880 111 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 RNU6-1229P-201ENST00000364295 107 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 RNU6-643P-201ENST00000384018 107 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.422-201ENST00000384054 114 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.477-201ENST00000384352 108 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 MIR606-201ENST00000384851 96 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
HMG20AQ9NP66 DEFB131E-201ENST00000532329 154 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 AC006504.6-201ENST00000590142 199 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 MIR8087-201ENST00000612745 78 ntBASIC0.02□□□□□ -2.41
HMG20AQ9NP66 SNORD114-26-201ENST00000363543 72 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 RNY1P6-201ENST00000384193 109 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.571-201ENST00000384753 98 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 MTND1P19-201ENST00000511780 315 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 RNA5SP480-201ENST00000516840 109 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 RNU7-35P-201ENST00000517174 62 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 AL117187.1-201ENST00000555482 181 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 MIR4639-201ENST00000584938 69 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 U6.109-201ENST00000636749 87 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 AC091304.10-201ENST00000641554 121 ntBASIC0.01□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.52-201ENST00000362760 96 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.366-201ENST00000365540 102 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 RNU6-716P-201ENST00000365621 103 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.626-201ENST00000411288 95 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 AC108059.2-201ENST00000434626 151 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 RNU7-113P-201ENST00000459273 62 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0□□□□□ -2.41
HMG20AQ9NP66 AL359881.1-201ENST00000602916 267 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 RNU1-29P-201ENST00000606574 126 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 U6.106-201ENST00000636360 105 ntBASIC0□□□□□ -2.41
HMG20AQ9NP66 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 RNA5SP63-201ENST00000391225 112 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 RNA5SP33-201ENST00000516687 98 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 AC138749.4-201ENST00000563970 127 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.01□□□□□ -2.41
HMG20AQ9NP66 MIR6718-201ENST00000616153 80 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms