Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC004812.1-201ENST00000540773 146 ntBASIC0.96□□□□□ -2.26
PCDH9Q9HC56 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
PCDH9Q9HC56 RNU6-934P-201ENST00000365154 107 ntBASIC0.95□□□□□ -2.26
PCDH9Q9HC56 SNORA32-201ENST00000384072 121 ntBASIC0.95□□□□□ -2.26
PCDH9Q9HC56 MIR1263-201ENST00000408324 86 ntBASIC0.95□□□□□ -2.26
PCDH9Q9HC56 RNA5SP102-201ENST00000516865 106 ntBASIC0.95□□□□□ -2.26
PCDH9Q9HC56 RNU6-971P-201ENST00000516920 106 ntBASIC0.95□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.118-201ENST00000363300 101 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.191-201ENST00000363972 113 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 RNU6-647P-201ENST00000364243 107 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.298-201ENST00000364960 107 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.531-201ENST00000384589 121 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 MIR563-201ENST00000385080 79 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 SNORD89-201ENST00000390981 114 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.586-201ENST00000391146 98 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 AL158147.1-201ENST00000443970 75 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 RPL39P25-201ENST00000449384 154 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 AC067940.1-201ENST00000458411 300 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 RN7SKP19-201ENST00000516016 252 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 RNU6-1061P-201ENST00000516530 99 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 RNY4P20-201ENST00000516678 93 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 IGKV1-22-201ENST00000524313 326 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 MIR4771-2-201ENST00000577758 74 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 MIR4771-1-201ENST00000582617 74 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 MIR6504-201ENST00000613520 61 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.94□□□□□ -2.26
PCDH9Q9HC56 RNU6-369P-201ENST00000362515 102 ntBASIC0.93□□□□□ -2.26
PCDH9Q9HC56 RNU6-704P-201ENST00000364162 103 ntBASIC0.93□□□□□ -2.26
PCDH9Q9HC56 MIR100-201ENST00000385259 80 ntBASIC0.93□□□□□ -2.26
PCDH9Q9HC56 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.93□□□□□ -2.26
PCDH9Q9HC56 MIR1276-201ENST00000408707 83 ntBASIC0.93□□□□□ -2.26
PCDH9Q9HC56 AC022523.2-201ENST00000561045 150 ntBASIC0.93□□□□□ -2.26
PCDH9Q9HC56 AL662814.1-201ENST00000617364 121 ntBASIC0.93□□□□□ -2.26
PCDH9Q9HC56 MIR1-1-201ENST00000362147 71 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.280-201ENST00000364765 112 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.508-201ENST00000384502 114 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 MIR518E-201ENST00000385252 88 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 RNU6-1086P-201ENST00000410930 100 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 MIR548AE2-201ENST00000583456 67 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 AL078603.1-201ENST00000603824 313 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 AC023934.1-201ENST00000574529 2389 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 AL589743.1-201ENST00000551932 2712 ntBASIC0.92□□□□□ -2.26
PCDH9Q9HC56 MIR96-201ENST00000362288 78 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.116-201ENST00000363292 103 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 RNU6-1104P-201ENST00000384723 104 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 RPS26P5-201ENST00000418544 335 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 RNU6-781P-201ENST00000516377 101 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 AC141846.1-201ENST00000568348 142 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
PCDH9Q9HC56 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
PCDH9Q9HC56 MIR30D-201ENST00000362283 70 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 MIR539-201ENST00000365690 78 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 MIR18B-201ENST00000454574 71 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 RNU7-79P-201ENST00000516082 62 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 RNU6-977P-201ENST00000516411 103 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 RNU6-1234P-201ENST00000516877 103 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
PCDH9Q9HC56 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
PCDH9Q9HC56 SNORD115-2-201ENST00000362842 82 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 SNORD115-20-201ENST00000365099 82 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 SNORD50.2-201ENST00000365465 70 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 AL603908.1-201ENST00000406098 201 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 SNORD93-201ENST00000408813 74 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 RNU7-185P-201ENST00000459215 60 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 SNORA4-201ENST00000584302 138 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 AC020891.4-201ENST00000605745 93 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 MIR6734-201ENST00000621166 68 ntBASIC0.89□□□□□ -2.27
PCDH9Q9HC56 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 RNU6-1335P-201ENST00000365426 107 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.525-201ENST00000384570 113 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 MIR1257-201ENST00000408490 117 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 RNU7-107P-201ENST00000459121 61 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 MIR4676-201ENST00000583078 72 ntBASIC0.88□□□□□ -2.27
PCDH9Q9HC56 RNU1-93P-201ENST00000364704 169 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 RNY1P13-201ENST00000365030 105 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.355-201ENST00000365462 98 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.528-201ENST00000384575 108 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 MIR520F-201ENST00000384824 87 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 MT-TF-201ENST00000387314 71 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 MIR759-201ENST00000390224 91 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 RNU4-69P-201ENST00000410677 143 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.617-201ENST00000410920 90 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 snoU13.18-201ENST00000459483 104 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 RNA5SP220-201ENST00000516298 104 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 RNU7-6P-201ENST00000516845 62 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms