Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 RNU6-322P-201ENST00000516010 103 ntBASIC1.25□□□□□ -2.21
RETREG1Q9H6L5 AC007012.1-201ENST00000567192 175 ntBASIC1.25□□□□□ -2.21
RETREG1Q9H6L5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.25□□□□□ -2.21
RETREG1Q9H6L5 SNORA1.1-201ENST00000364671 133 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 Y_RNA.281-201ENST00000364774 94 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 RNU6-392P-201ENST00000364926 101 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 Y_RNA.362-201ENST00000365518 110 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 MIR1185-1-201ENST00000408598 86 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 AC244023.1-201ENST00000426884 112 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 AC242498.1-201ENST00000604134 111 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
RETREG1Q9H6L5 SNORA25.3-201ENST00000363205 127 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 RNU6-880P-201ENST00000384526 107 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 AL353813.1-201ENST00000440700 253 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 MIR4679-2-201ENST00000578358 77 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 MIR548AE2-201ENST00000583456 67 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 Y_RNA.773-201ENST00000607168 90 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RETREG1Q9H6L5 RNU6-153P-201ENST00000364422 104 ntBASIC1.22□□□□□ -2.21
RETREG1Q9H6L5 RNU6-342P-201ENST00000384521 104 ntBASIC1.22□□□□□ -2.21
RETREG1Q9H6L5 SNORD12C-201ENST00000386307 89 ntBASIC1.22□□□□□ -2.21
RETREG1Q9H6L5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
RETREG1Q9H6L5 AC113410.1-201ENST00000505029 247 ntBASIC1.22□□□□□ -2.21
RETREG1Q9H6L5 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
RETREG1Q9H6L5 Y_RNA.85-201ENST00000363014 111 ntBASIC1.21□□□□□ -2.22
RETREG1Q9H6L5 MIR548D2-201ENST00000384955 97 ntBASIC1.21□□□□□ -2.22
RETREG1Q9H6L5 AL022718.1-201ENST00000412004 84 ntBASIC1.21□□□□□ -2.22
RETREG1Q9H6L5 PDCD5P2-201ENST00000507570 312 ntBASIC1.21□□□□□ -2.22
RETREG1Q9H6L5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.21□□□□□ -2.22
RETREG1Q9H6L5 MIR8070-201ENST00000616510 88 ntBASIC1.21□□□□□ -2.22
RETREG1Q9H6L5 MIR1255B1-201ENST00000636325 63 ntBASIC1.21□□□□□ -2.22
RETREG1Q9H6L5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 SNORA22-201ENST00000383907 134 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 RNU6-106P-201ENST00000384405 107 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 RPS3AP1-201ENST00000413190 320 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 RNU7-113P-201ENST00000459273 62 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 uc_338.6-201ENST00000613544 171 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.2□□□□□ -2.22
RETREG1Q9H6L5 SNORD115-19-201ENST00000363098 82 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 SNORD115-18-201ENST00000363293 82 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 Y_RNA.213-201ENST00000364178 111 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 RNU6-654P-201ENST00000364373 107 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 SNORD115-17-201ENST00000364612 82 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 RNU6-1067P-201ENST00000384752 107 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 RNU6-1307P-201ENST00000391012 103 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 RNU6-554P-201ENST00000410466 106 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 RNU6-947P-201ENST00000516264 106 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 RNU7-6P-201ENST00000516845 62 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 MIR3152-201ENST00000579801 74 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 AL357312.1-201ENST00000603879 298 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 uc_338.28-201ENST00000612082 187 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 MIR6516-201ENST00000630554 81 ntBASIC1.19□□□□□ -2.22
RETREG1Q9H6L5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 RNY4P6-201ENST00000363667 96 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 RNU6-1107P-201ENST00000364817 104 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 Y_RNA.323-201ENST00000365157 109 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 RNA5SP261-201ENST00000410536 106 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 RNU4-69P-201ENST00000410677 143 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 RNA5SP247-201ENST00000411181 105 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 MTATP6P29-201ENST00000415057 132 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 RNA5SP33-201ENST00000516687 98 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 RNU7-35P-201ENST00000517174 62 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 MIR3163-201ENST00000581592 73 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 MIR6740-201ENST00000618268 113 ntBASIC1.18□□□□□ -2.22
RETREG1Q9H6L5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 RNA5SP264-201ENST00000363115 107 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 SNORA63.5-201ENST00000363548 123 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 RNU6-147P-201ENST00000383983 107 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 SNORA32-201ENST00000384072 121 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 RNU6-616P-201ENST00000384353 107 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 MIR563-201ENST00000385080 79 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 RNU6-94P-201ENST00000607728 107 ntBASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RETREG1Q9H6L5 U8.6-201ENST00000364939 135 ntBASIC1.16□□□□□ -2.22
RETREG1Q9H6L5 SNORA18-201ENST00000384416 132 ntBASIC1.16□□□□□ -2.22
RETREG1Q9H6L5 AC096949.1-201ENST00000412047 152 ntBASIC1.16□□□□□ -2.22
RETREG1Q9H6L5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.16□□□□□ -2.22
RETREG1Q9H6L5 RNU6-893P-201ENST00000458841 100 ntBASIC1.16□□□□□ -2.22
RETREG1Q9H6L5 RNU6-537P-201ENST00000517277 103 ntBASIC1.16□□□□□ -2.22
RETREG1Q9H6L5 Y_RNA.116-201ENST00000363292 103 ntBASIC1.15□□□□□ -2.23
RETREG1Q9H6L5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
RETREG1Q9H6L5 RNU6-1014P-201ENST00000383940 103 ntBASIC1.15□□□□□ -2.23
RETREG1Q9H6L5 RNA5SP95-201ENST00000410319 137 ntBASIC1.15□□□□□ -2.23
RETREG1Q9H6L5 SNORA19.1-201ENST00000410656 129 ntBASIC1.15□□□□□ -2.23
RETREG1Q9H6L5 AC245047.7-201ENST00000440265 293 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 278.3 ms