Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 MTND5P18-201ENST00000445624 1801 ntBASIC0.93□□□□□ -2.26
PCNX3Q9H6A9 Y_RNA.213-201ENST00000364178 111 ntBASIC0.93□□□□□ -2.26
PCNX3Q9H6A9 MIR1263-201ENST00000408324 86 ntBASIC0.93□□□□□ -2.26
PCNX3Q9H6A9 MIR4295-201ENST00000585286 85 ntBASIC0.93□□□□□ -2.26
PCNX3Q9H6A9 Y_RNA.298-201ENST00000364960 107 ntBASIC0.92□□□□□ -2.26
PCNX3Q9H6A9 AL591704.2-201ENST00000421658 181 ntBASIC0.92□□□□□ -2.26
PCNX3Q9H6A9 AL512326.2-201ENST00000426359 151 ntBASIC0.92□□□□□ -2.26
PCNX3Q9H6A9 snoU13.21-201ENST00000459368 105 ntBASIC0.92□□□□□ -2.26
PCNX3Q9H6A9 RNU6-412P-201ENST00000516434 106 ntBASIC0.92□□□□□ -2.26
PCNX3Q9H6A9 PRELID3BP2-201ENST00000605362 201 ntBASIC0.92□□□□□ -2.26
PCNX3Q9H6A9 MT-TI-201ENST00000387365 69 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 RNU6-205P-201ENST00000390858 107 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 SNORD111-201ENST00000408139 94 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 COX6CP6-201ENST00000490840 228 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 RNA5SP445-201ENST00000515889 115 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 RNU6-659P-201ENST00000516454 104 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 AL157777.2-201ENST00000258070 137 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 SNORD115-2-201ENST00000362842 82 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 SNORD115-20-201ENST00000365099 82 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 SNORD114-22-201ENST00000365423 72 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 SNORA25-201ENST00000384384 134 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 MIRLET7F2-201ENST00000385277 83 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 MIR548A3-201ENST00000385297 97 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 RNU7-90P-201ENST00000459216 62 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 RNU7-35P-201ENST00000517174 62 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 AL365222.1-201ENST00000614661 98 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 RMST_2.1-201ENST00000617263 136 ntBASIC0.91□□□□□ -2.26
PCNX3Q9H6A9 MIR103A2-201ENST00000362154 78 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 SNORA63.5-201ENST00000363548 123 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.198-201ENST00000364013 98 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 SNORA18-201ENST00000384416 132 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 MIR489-201ENST00000384923 84 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 SNORD33.1-201ENST00000516213 88 ntBASIC0.9□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.273-201ENST00000364703 102 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 RNU1-93P-201ENST00000364704 169 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.507-201ENST00000384500 99 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 MIR377-201ENST00000362145 69 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 RNY4P6-201ENST00000363667 96 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.168-201ENST00000363740 102 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.171-201ENST00000363760 102 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.353-201ENST00000365440 108 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 RNU6-1056P-201ENST00000383996 107 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 RNU6-1321P-201ENST00000390905 107 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 MIR1912-201ENST00000410389 80 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 MTND5P34-201ENST00000568888 325 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.89□□□□□ -2.27
PCNX3Q9H6A9 RNU6-949P-201ENST00000384040 107 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 SNORA75.2-201ENST00000391138 150 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 SNORA75.3-201ENST00000391231 150 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 RNA5SP237-201ENST00000410414 113 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 RNU7-62P-201ENST00000458856 62 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 AC022523.2-201ENST00000561045 150 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 U6.95-201ENST00000636931 70 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 RNU6-364P-201ENST00000384387 107 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 RNU6-1104P-201ENST00000384723 104 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 MT-TF-201ENST00000387314 71 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 RNU4-69P-201ENST00000410677 143 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 OR2A41P-201ENST00000473586 105 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 RPS23P4-201ENST00000487908 423 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 AL162726.3-218ENST00000636401 95 ntBASIC0.88□□□□□ -2.27
PCNX3Q9H6A9 SNORA22.1-201ENST00000362701 134 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 RNU6-654P-201ENST00000364373 107 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 RNU6-580P-201ENST00000365159 107 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 AL158147.1-201ENST00000443970 75 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 MIR1270-201ENST00000459320 83 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 SNORD79.1-201ENST00000516069 84 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 RNU7-79P-201ENST00000516082 62 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 MIR3163-201ENST00000581592 73 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 AC087741.2-201ENST00000619415 172 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 MIR6515-201ENST00000619843 57 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.35-201ENST00000362601 101 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 SNORD114-10-201ENST00000363409 72 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.281-201ENST00000364774 94 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.362-201ENST00000365518 110 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 MIR18B-201ENST00000454574 71 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 SNORD67.1-201ENST00000516618 108 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 MIR2115-201ENST00000516657 100 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 AC012676.2-201ENST00000619258 186 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 MIR3914-2-201ENST00000637339 95 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 SNORA80D-201ENST00000384488 135 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 SNORD20-201ENST00000384550 80 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 411.1 ms