Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 RNU4-32P-201ENST00000363404 141 ntBASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 MIR559-201ENST00000385188 96 ntBASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 PMCHL1-202ENST00000423102 261 ntBASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 RNY1P9-201ENST00000532431 109 ntBASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 RPS29P30-201ENST00000600975 111 ntBASIC-1.43□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 RNA5SP192-201ENST00000364404 120 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 SNORD114-29-201ENST00000364819 70 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 RNU6-429P-201ENST00000384582 108 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 RNU2-55P-201ENST00000411146 174 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 SCARNA18B-201ENST00000458806 135 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 RNU6-507P-201ENST00000516045 100 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 RNA5SP153-201ENST00000516498 76 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 RNU6-699P-201ENST00000517081 110 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 AC097639.2-201ENST00000603159 172 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.44□□□□□ -2.64
CHMP4BQ9H444 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 SNORD56B-201ENST00000384713 71 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 AL603914.1-201ENST00000401964 204 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 RNU7-13P-201ENST00000516413 62 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 RNA5SP461-201ENST00000516451 104 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 RNU7-137P-201ENST00000516788 62 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 RNU7-30P-201ENST00000516835 62 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 RNU6-175P-201ENST00000516896 107 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 AC006006.1-201ENST00000603082 144 ntBASIC-1.45□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 SNORA53-201ENST00000391141 249 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 U8.20-201ENST00000459445 131 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 RNA5SP33-201ENST00000516687 98 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 AC024909.2-201ENST00000553035 286 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 MIR4280-201ENST00000582178 76 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 MIR3688-2-201ENST00000636963 87 ntBASIC-1.46□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 MIR9-2-201ENST00000384838 87 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 RNA5SP395-201ENST00000516567 118 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 SNORD67.1-201ENST00000516618 108 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 MIR5688-201ENST00000580619 83 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 AC103591.3-201ENST00000608684 209 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 AC133104.2-201ENST00000615272 193 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 AC069503.3-201ENST00000618674 145 ntBASIC-1.47□□□□□ -2.64
CHMP4BQ9H444 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 MIR539-201ENST00000365690 78 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 MTND1P29-201ENST00000448112 647 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 AC140658.3-201ENST00000567603 271 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 YWHAEP2-201ENST00000580066 112 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 MIR6086-201ENST00000638065 55 ntBASIC-1.48□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 SNORA32-201ENST00000384072 121 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 RNU6-901P-201ENST00000384593 106 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 MTND5P40-201ENST00000559945 246 ntBASIC-1.49□□□□□ -2.65
CHMP4BQ9H444 SNORD115-44-201ENST00000365391 82 ntBASIC-1.5□□□□□ -2.65
CHMP4BQ9H444 RNU6-431P-201ENST00000383874 107 ntBASIC-1.5□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.5□□□□□ -2.65
CHMP4BQ9H444 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.5□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.5□□□□□ -2.65
CHMP4BQ9H444 AL359881.1-201ENST00000602916 267 ntBASIC-1.5□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 SNORD113-8-201ENST00000363497 74 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 SNORD116-1-201ENST00000384335 95 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 SNORD64-201ENST00000386683 67 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 MIR4306-201ENST00000583390 91 ntBASIC-1.51□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.52□□□□□ -2.65
CHMP4BQ9H444 MIR517B-201ENST00000385102 67 ntBASIC-1.52□□□□□ -2.65
CHMP4BQ9H444 SNRPGP8-201ENST00000454064 226 ntBASIC-1.52□□□□□ -2.65
CHMP4BQ9H444 MIR548AE1-201ENST00000583292 70 ntBASIC-1.52□□□□□ -2.65
CHMP4BQ9H444 MTND5P18-201ENST00000445624 1801 ntBASIC-1.52□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.53□□□□□ -2.65
CHMP4BQ9H444 SNORD114-10-201ENST00000363409 72 ntBASIC-1.53□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.53□□□□□ -2.65
CHMP4BQ9H444 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.53□□□□□ -2.65
CHMP4BQ9H444 RNU6-154P-201ENST00000384306 106 ntBASIC-1.53□□□□□ -2.65
CHMP4BQ9H444 RNU6-102P-201ENST00000384485 104 ntBASIC-1.53□□□□□ -2.65
CHMP4BQ9H444 HSPE1P25-201ENST00000455484 251 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms