Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DNAJC19P9-201ENST00000555084 351 ntBASIC1.98□□□□□ -2.09
VPS11Q9H270 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
VPS11Q9H270 SNORD38.1-201ENST00000363863 68 ntBASIC1.97□□□□□ -2.09
VPS11Q9H270 SNORA1.2-201ENST00000365189 134 ntBASIC1.97□□□□□ -2.09
VPS11Q9H270 AL034345.1-201ENST00000407768 123 ntBASIC1.97□□□□□ -2.09
VPS11Q9H270 AC008834.1-201ENST00000511612 175 ntBASIC1.97□□□□□ -2.09
VPS11Q9H270 RNU7-12P-201ENST00000516030 62 ntBASIC1.97□□□□□ -2.09
VPS11Q9H270 RNU7-35P-201ENST00000517174 62 ntBASIC1.97□□□□□ -2.09
VPS11Q9H270 SNRPGP19-201ENST00000603826 189 ntBASIC1.97□□□□□ -2.09
VPS11Q9H270 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.09
VPS11Q9H270 SNORA70.7-201ENST00000384159 133 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 Z98742.3-201ENST00000418637 326 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 RPL31P63-201ENST00000422565 375 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 SNORD123-201ENST00000459473 70 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 SNORD67.1-201ENST00000516618 108 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 SNORA77B-201ENST00000578179 125 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 AC243994.1-201ENST00000618627 109 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 MIR8065-201ENST00000620577 100 ntBASIC1.96□□□□□ -2.1
VPS11Q9H270 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS11Q9H270 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VPS11Q9H270 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
VPS11Q9H270 MIR452-201ENST00000385020 85 ntBASIC1.95□□□□□ -2.1
VPS11Q9H270 RNU6-788P-201ENST00000390967 104 ntBASIC1.95□□□□□ -2.1
VPS11Q9H270 SNORA3.2-201ENST00000408221 125 ntBASIC1.95□□□□□ -2.1
VPS11Q9H270 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS11Q9H270 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.95□□□□□ -2.1
VPS11Q9H270 MIR8055-201ENST00000610739 97 ntBASIC1.95□□□□□ -2.1
VPS11Q9H270 AC021506.2-201ENST00000612354 169 ntBASIC1.95□□□□□ -2.1
VPS11Q9H270 U8.2-201ENST00000363156 134 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 Y_RNA.448-201ENST00000384185 108 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 Y_RNA.567-201ENST00000384736 106 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 MIR194-1-201ENST00000384892 85 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 MIR136-201ENST00000385207 82 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 MIR548G-201ENST00000408442 89 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 RNA5SP425-201ENST00000410336 112 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 AL161935.2-201ENST00000414627 60 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 RNU1-98P-201ENST00000458992 160 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 AC099513.1-201ENST00000490423 301 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 AL513043.2-201ENST00000573941 143 ntBASIC1.94□□□□□ -2.1
VPS11Q9H270 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS11Q9H270 MIR424-201ENST00000362227 98 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 Y_RNA.173-201ENST00000363776 113 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 RNU6-203P-201ENST00000384038 104 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 SNORA70B-201ENST00000384210 135 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 Y_RNA.565-201ENST00000384719 101 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 RNU6-1321P-201ENST00000390905 107 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 RNA5SP261-201ENST00000410536 106 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 AL161932.1-201ENST00000437408 146 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 AC245047.7-201ENST00000440265 293 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 RPS29P28-201ENST00000446439 141 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 snoU13.9-201ENST00000458927 103 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 AC140658.3-201ENST00000567603 271 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 AC105081.1-201ENST00000617727 106 ntBASIC1.93□□□□□ -2.1
VPS11Q9H270 RNU6-1123P-201ENST00000362347 106 ntBASIC1.92□□□□□ -2.1
VPS11Q9H270 RNU6-457P-201ENST00000363999 107 ntBASIC1.92□□□□□ -2.1
VPS11Q9H270 AL356320.1-201ENST00000429616 163 ntBASIC1.92□□□□□ -2.1
VPS11Q9H270 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS11Q9H270 RNU7-137P-201ENST00000516788 62 ntBASIC1.92□□□□□ -2.1
VPS11Q9H270 MIR3945-201ENST00000581853 98 ntBASIC1.92□□□□□ -2.1
VPS11Q9H270 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS11Q9H270 MIR181B2-201ENST00000385004 89 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 MIR519C-201ENST00000385053 87 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VPS11Q9H270 MIR934-201ENST00000401241 83 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 AC004965.1-201ENST00000413033 213 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS11Q9H270 AC087499.7-201ENST00000441958 109 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 FAM106DP-201ENST00000586416 501 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 AL513423.1-201ENST00000621695 132 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS11Q9H270 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
VPS11Q9H270 Y_RNA.537-201ENST00000384626 109 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 RNU6-602P-201ENST00000411155 105 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 AC005908.1-201ENST00000468701 347 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 AC004223.1-201ENST00000479840 271 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 RNU7-79P-201ENST00000516082 62 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 MIR1273D-201ENST00000577266 86 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS11Q9H270 AC145423.2-201ENST00000610631 239 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 Y_RNA.788-201ENST00000622394 112 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS11Q9H270 Z97988.1-201ENST00000637697 135 ntBASIC1.9□□□□□ -2.11
VPS11Q9H270 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS11Q9H270 RNU6-478P-201ENST00000363904 110 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 SNORA2B-201ENST00000384583 137 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 RNU6-1086P-201ENST00000410930 100 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 snoU13.16-201ENST00000459350 104 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 AC093729.1-201ENST00000513074 128 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 RNU6-523P-201ENST00000516304 54 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 RNU7-153P-201ENST00000516455 62 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 RNU6-90P-201ENST00000606352 106 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 SNORD3E-202ENST00000627253 216 ntBASIC1.89□□□□□ -2.11
VPS11Q9H270 RNA5SP133-201ENST00000363368 119 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms